YALI0F09141g

Overview

Description some similarities with uniprot|P12689 Saccharomyces cerevisiae YOR346w REV1 DNA repair
Locus type CDS
Locus tag YALI0F09141g

Location

Species Yarrowia lipolytica Positions 1275533..1279271
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 3739 (nuc.)
Previous locus YALI0F09119g Next locus YALI0F09163g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F09141g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F09141gYALI0F09141g_mRNA-001YALI0F09141g_CDS-001

Nucleotide sequence

 

>YALI0F09141g
ATGGTCAACCAGAGGGCCAAAGATACATACCTCAGCCCGCAGGCTAGGGTGGCGGGAGAA
AAGGAGGAGGCTGAGGAGTATGGACCCACGGGGTTTGGAGATATCGGCAAGTACATTGTC
AACAAGGAGCGCAAGCTGCTGAATGCCGATATCACACTGCGAAACAATGCCATAGCAGCT
GCCAAGGAACAGGGCAAGGAGGTGCCGCAACTGTTCAAGGATTGTGTTGTATATGTCAAC
GGATACACACGTCCGTCGGCCAACGAGCTACGTCGCATGATTGTTATTCATGGAGGTGTC
TATTTGACCAATTTGCACCTGTCTGGAAAGACTGGAGTGACTCATATAGTGGCCAGCAAT
CTCACCAAAAAGAAGAAGCTCGAGTTTCAGAGCTACAAGGTGGTCACTCCCGACTGGGTG
GTCGATAGTGTCAAAGAGAGCAAGGTGCAGGACTGGGCCAAGTACAGGTTGATTGTGGAC
ACGGGCAACAAAAATGTCCTGGGGTTGTTCAAGGCCAAGATGGCTACAGAGTCGTTTCAG
GAGCTGTTAGATGAGGAGTTGGGTGATGGTGGAGATTTGACACAGTCTCTGCCGACGATA
GAAGAACCCACCAAGTGTTCCATTATCCCATCATCTCTAGCTTCTCCCGCTCACAGCATG
AAACCACCGGTGAGCAAGGAACCTGTGGCATTATTTCCTCGTCCTTCACTGGCGAGAAAA
GCCGAGCGTGCTCCCTCAGTAGAGTCGCCAGCACCGAAACGAGCCAAACCTATCCCTTCG
TTCTCATCGTTCGAGTTGTCTTTCGATGAGGAGGAGCTGTTCAACTCCCTGCCACGTCCA
GGAGCAAAGGGCGAGTCAGAGAGCCGGACTATGGGCACCCAAGAGACTCAGACCCAGGAG
GGGACAGATAAAACCGAGGAGACCCAGGAAGAGACCCGGGGGCAAACTGAGGACGAAGCT
CGATACGAAACAGTCACGACTGCAGATAATGACGTACCAATCTCGTCCCTGCCCTTCAGC
AGCAGCATGTTACGAGCTGTGGACCAGAGCATCGACGCTGTGAAGGCGGAGGATGCAAAC
TACGACGACTTGGAGTTCAGTCAGAGTGAGTTACTGGGGGTGTTGAGTCAAGTAGGTGAC
GGTTCTGTACTTGAACAGGCGTTGGAGACTGAAGGTGAGATACAGGTTGACAAAGGAGAG
CCCCCAGATCAGTTAGAAGACTCAGACTTTGACTTCTTGGACCACATTAGTGCCGAGGAG
TCTGCTGACGAATCTGAGAAGGAAGACCCTGCTGTGGAAAGATTGGCAAAGGAAGAGTCG
TCGGGAAGATCAGTTACTCCACCAATTCGCCCGGAAGATCAGCTGTCGACGACACCAATC
AAACGGACTAGCAAACTTCCGTATGCAATCGACGATCCCAGATTCATCTCCCACTTTTAC
GAAAAGTCTCGTCTGCACCATCTCTCTACCTGGAAGGCCCGTCTACAGGCTAAATTCGAG
TTGTCTTCCAAAAACAAACAAGTACCACCTCCTATATCTGGAGGCGATCGGATCATCATG
CACCTTGACTTCGACTCCTTCTTCGTGGCGGTATCTACGCTTGACAGGCCAGATCTGACC
AGAAAACCGGTTGCGGTAGGCAGTGGAGGATCCAGAAACGCTGACATAGCCAGTTGCAAC
TACGAGGCTCGAAAATACGGCGTCAAGAACGGCATGTGGATGTCACGTGCCCTGAAACTG
TGCCCAGATCTGCAGACTGTGGACTACAACTTCCCCAAGTACGAGGAGGTGTCTGAGGCG
TTTTATACAATCCTAAGAGAGTCTCAGCTGGACTACATTCGGCCAGTTTCTGTTGATGAG
GCCCTTGTAGATGCCACAACTCTCATCGAGGCCAATGCGACCGAGTGTTCACTCTCTGAA
GCTGCCGAAACAGTTGCGAAAGCTATCGCGACCAAAGTGAGGGCCACGACAGGATGCAAC
ATCTCTGTTGGCTGTTCCAGAAACATACTACTAGCTAAACTCGCTCTTCGAGAAGCCAAA
CCGAACGGAGTCCATGTCATGTTTGACCAGAAAGCTATTTCCCAACTCCTGGATAAGACC
AAGATTTCAGAAATCCCTGGTATAGGCAGGTCAATAGCTGGTCAGATTCGCGAAAAACTG
CATGTGTCAACTGCAGGTAAACTAGCTCGTCTGAAGGACGTGATTCCAAACATGTCTGCT
CTATTGGGCCCCAAACGAGGGCCTCAGATTGTCGACTTTTGTCTTGGCAAAGATGACTCT
CAGATAGCTGTCCAGGATGAACGCAAATCCATCAGTGTGGAGATTTCTTATGGAGTTCGG
TTCGAGAACAAGAAGCAGTTCGACGGGTTTGTGTTTAACATGTCTGCCGAGCTGGCTTCT
CGAATGGAGGAGATTTCTGTCGAGGGCAGCCAGTTGACGTGCAAGCTCTATGTGCGTAAA
AACGAGCATGAGACCCCCAAGTACATGGGCCATGGACAGTGCGACATTTACAACAAGAGT
GTGAGTCTGGGGTGCTCGGTGAGCAGTACAAGTGAGATTAATTTGGCTGCCAGGGGCCAG
TTTGCTGCTATGGGATACGATCCTGTATTGGTTAGAGGAGTGGGTATTCAGATAACCAAA
CTGACCCGTGATAAGGGTAAGGGAAAACAGTCCATGCTGGACTTCAATCGGGGAAGAACC
ACTAGACCCGATCTACGTGCCCCTATCATGCCCCCAGCGGGCACTCAGTTTGATATTCCC
GCTGATATCGACCCCGAGGTGCTTCCTTTTCTTCCTGCTTCCCTTCGAAAACAGATTGAG
ACTAGAATGGGCATTACCGGTGGTTCTAGAGGTGCATTGGATCCGCCTAAAACGCCAACC
AAAAAGAACCAGCAAGAAATGGGCTCGTTTTTCAGCCCCAGCCCCAGCAAGAGCGTCTAC
GCAACCCCGGGACTGAGTCAGAGCTCTCCCATTCGAGCACCAAGTATCTCACCTTCTCCA
CGACGAGCCAAGTCGGTCAGTCCTCGGAAGCGTCCTGGAAAGCCTGCTGCCAAGACCCAG
ATCAAGCGTCAGAAGGCCAACGTCAGGATATCTCATTTGCTTCCAGACGTGCAGGTCTGT
TCGGAGGAGATGGCGGCTCTCCAGAACGAGCTGGCCATATTGAAGGCTGCTCTTGGAGAA
GGCACTCCCGTGGAGCTGGTGACACGAATGATGCCTCTGGTGAACTCGCAGACGGACATG
AACATTTTTATGGAACTGTCGTCGTCCATTCAACAAGAGGTGATCATGGATTACCGTAAC
GAGATCCAGCGCAAGATTGCTAGCATCTCAAGACAGTTGGAGGATCTCAAGGAGAAGGAA
CGGATCGAACGAAGCCGAGAAGGCTCGAACCTGAGAACTATCTCCCTGGGAACGGTTACT
CGAAACAGACCAGATACTCAGGAGCTGTTGAGTAGACTCAGTCAGTGGGTTAAATCTAGC
TACGACGGTCCCCATGAAGATGACGTTACTCATATGATCAGACGGCTACGGCATTACCGC
AACGAGGGGTACCACGAGGTAGTCAACGCCTCTGTTCGTTGGCTTTCCAAATTGAGTGCC
AAAAGTCCAGATTGGTCGGGGGTTGTGAGAGATATAATAGTTGGTTTGCAGGAGGGATAA
GGGAAATGGAGGGAAGTGGAGGGTGGTGAAGGAACGGTTATTTATTGTTGTATTTATTAT
ATCATCTATTTTTTCATCA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F09141g_CDS-001

Protein length: 1220 aa.
Product: Conserved hypothetical protein

>YALI0F09141g_CDS-001 MVNQRAKDTYLSPQARVAGEKEEAEEYGPTGFGDIGKYIVNKERKLLNADITLRNNAIAA
AKEQGKEVPQLFKDCVVYVNGYTRPSANELRRMIVIHGGVYLTNLHLSGKTGVTHIVASN
LTKKKKLEFQSYKVVTPDWVVDSVKESKVQDWAKYRLIVDTGNKNVLGLFKAKMATESFQ
ELLDEELGDGGDLTQSLPTIEEPTKCSIIPSSLASPAHSMKPPVSKEPVALFPRPSLARK
AERAPSVESPAPKRAKPIPSFSSFELSFDEEELFNSLPRPGAKGESESRTMGTQETQTQE
GTDKTEETQEETRGQTEDEARYETVTTADNDVPISSLPFSSSMLRAVDQSIDAVKAEDAN
YDDLEFSQSELLGVLSQVGDGSVLEQALETEGEIQVDKGEPPDQLEDSDFDFLDHISAEE
SADESEKEDPAVERLAKEESSGRSVTPPIRPEDQLSTTPIKRTSKLPYAIDDPRFISHFY
EKSRLHHLSTWKARLQAKFELSSKNKQVPPPISGGDRIIMHLDFDSFFVAVSTLDRPDLT
RKPVAVGSGGSRNADIASCNYEARKYGVKNGMWMSRALKLCPDLQTVDYNFPKYEEVSEA
FYTILRESQLDYIRPVSVDEALVDATTLIEANATECSLSEAAETVAKAIATKVRATTGCN
ISVGCSRNILLAKLALREAKPNGVHVMFDQKAISQLLDKTKISEIPGIGRSIAGQIREKL
HVSTAGKLARLKDVIPNMSALLGPKRGPQIVDFCLGKDDSQIAVQDERKSISVEISYGVR
FENKKQFDGFVFNMSAELASRMEEISVEGSQLTCKLYVRKNEHETPKYMGHGQCDIYNKS
VSLGCSVSSTSEINLAARGQFAAMGYDPVLVRGVGIQITKLTRDKGKGKQSMLDFNRGRT
TRPDLRAPIMPPAGTQFDIPADIDPEVLPFLPASLRKQIETRMGITGGSRGALDPPKTPT
KKNQQEMGSFFSPSPSKSVYATPGLSQSSPIRAPSISPSPRRAKSVSPRKRPGKPAAKTQ
IKRQKANVRISHLLPDVQVCSEEMAALQNELAILKAALGEGTPVELVTRMMPLVNSQTDM
NIFMELSSSIQQEVIMDYRNEIQRKIASISRQLEDLKEKERIERSREGSNLRTISLGTVT
RNRPDTQELLSRLSQWVKSSYDGPHEDDVTHMIRRLRHYRNEGYHEVVNASVRWLSKLSA
KSPDWSGVVRDIIVGLQEG*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG