YALI0F08371g

Overview

Description similar to uniprot|Q99207 Saccharomyces cerevisiae YDL148C nuclear and nucleolar protein
Locus type CDS
Locus tag YALI0F08371g

Location

Species Yarrowia lipolytica Positions 1175460..1177996
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 2537 (nuc.)
Previous locus YALI0F08349g Next locus YALI0F08393g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F08371g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F08371gYALI0F08371g_mRNA-001YALI0F08371g_CDS-001

Nucleotide sequence

 

>YALI0F08371g
ATGGCCAAAACGAGTCAGCTCAAGCGGCTCAAGGAGACGCTCAAGAAGAACGATCTGACG
GGCCAGACTAATGTCAAGGGCAATAAAAAGAAGATGAACAGCGGCAAAAACCGCCAGGAC
AGAGACAAGGTGCTGTCTGACATCCGGCAGCAGTTCAACCCTTTCGATGTCAAGGTGGCC
AGGAAGAAGCATGATATTGGAGGCCGAACCGTACGGGGCAGTGTGGGACGACCTGGACTG
TCCAAGCTCAGTGGCGAGGAAGCCCGTATGGAGGCTCGAAAGCTGGAGTTGCAAAACAAG
GGACGGGTTGGAGGAGTGTTTGACCGGCGGTTTGGAGAGGGTGACTCCAACATGAATCCC
GAGGAGAAAATGCTGGAGCGGTTTACGCGGGAGCGACAGCTTCGGTCGATGGGTGGTGGT
CGAAACAAGTCGATTTTCGCTCTTGACGATGACGATGACGACGCCGACGCTGATATGATG
CTGACTCACTCTGGTCAGGCTCTTGATTTCAAGGACGATTTTGATCAGGGCGATCTGGGT
ATTGAGGCCGAGGAGGACGAGGAGATGGCAGCCATTCTTGCCAACCGACGCAAGCTAGCA
GAGGAGCGGGGTATGGGTGCTATGGGAGTCAATCTGGAGGAGATGGACGGAGTTGATATG
GAGGAGGCGGGCACTGGCCGAAAGAAGAGCAAGGAGGAGGTCATGAAGGAGATCATTGCC
AAGTCCAAGTTCCACAAGGCCGAGCGACAGGCAGCTCGTGACAAGGACCAGGCGATTATC
GAGGAAATGAACGACGAGGACACCATGAATGCTCTGATCCGGGAGCTGGGATCTATCAAG
GCCAAGAAGGTGGTGACAGCTCTGGACCAGAAGGAGAAGGAGTACGACCAGAACTTCCGA
AACATGATTCTGGACCGTCGAGCCAAGCCTCAGGACAGAACTAAGACTGACGAGGAGCTG
GCCAAAGAGGAGGCTGAAAAGCTCAAGAAGCTGGAGGATGAGCGACAGGCCCGAATGCGA
GGCGAGGTTGCCATTGACCAGGGCGAAGGCGATGATCTGGACGGCAATGTGGCGTTTGAC
TTTGAGAATTCCGAGGAGGAGGGTGAGGATGATGAAGACGAGGCCGAAGATGATGATGAT
GAAGATGTTGAGATTCATGAAGTAGATGAAGACGAAGATGAGTCTGGCGATAAATCTGGT
GATGAATCTGGCGAGGAGGAGACTACAAAGTCCGAGCCAGCCTCAAAGTCTTCCTCCTCC
ACTCTAGCATACACATTTCCCATCCCCAAATCACACAAGATGTTCTTGGAGACCACATCG
GCCTACCCTCTGGACCAGCTGCCCACCATCATCGACCGGATCAACGTTTTGCATCACGCC
TCGCTCAAGGAGGGCAACAAAGAGCGTCTAGCCAAGTTTGCATGCGTGCTCATCGACCAT
CTCATGTACCTCGCCGACGAAGAGGAGGAGGACGACTTTGAGTGTTTGTCTGAAGTCGTC
GCTAAAGTGCACACTTTGGCGGAAACTCACAGTCCTACTATGGCTGCTCACATCAGAAAG
AAGTTGGAGGCTCATCAGGCCGACACTACAGTTACGGCCGGTCATCTCATGCTGTGGACT
TTGATTGGCATGATTTTCTCCACGTCCGATCATTTCCACCTGGTTGTGACGCCTGCGGTG
CTCGTTATGACCCGTTTCCTGTCTCTGTCCACCTTTGACTCCATTCCCAAGTGCATTGCC
GGGCTGTACACCGCCCAGCTGTTGATCCAGTACCAGCGAATTGCCAAGCGGTTCATTCCC
GAGATTGCCGTCTTCCTGGGCCGTCTGATTGCTGCTCTGGAAGGCACTGAGACTTCTCTT
CCCATGGCTTCTCTTTTCAAGATTGCTCCTATCAAGGGTTTCACTCCTGGTAAGGCTTCC
CACAAGTCTACCGATAAGACCATCTCAATGAGATCAGCCAACCGATCCATTCTGAGCAAG
AAGGAGGTGGCCACGCTATCTCAGGAGCTCCATAACCAGGCCGTGTTTTCCGTCTCCAAG
CTCATGGACACATACAAGGACATTTCAGCCTTCCCTGAGACTTTCGAGTTCTGCGAGAAC
ATTCCCGAGCTTGCAGACAAGTATAGCCGAATCACCAAGTTCAAGTTGGCTGACCGAAAG
CCTCTCACTCTACACAAGCACCGACCCCTGGCCATCAAGACCATGGCCCCCAAGTTCGAG
GAAAACTTCAACGTGGACAAAAAGTCGTACAACCCGGATATGGCGCTACAGGAGACCCAG
AAACTTCGAGCCGAGCTCAAGAAGGAGAAGAAGAGCGCGCTGCGGGAGATCCGAAAGGAC
GCCGCCTTCGAGGCCCGAGAAAAGATCCGAGAACGACGAGAGAAGGACGACGCCTACCAC
GAAAAGATGGCTCGACTGGTGCGATCTGTGCAGACCGAGGAGGGAGCCGAAAAGAACGCC
TACGAGAGAGAACGGGCCAGCAGAAAGCGAAAGCGATAGATGCAGAGCGGAGATATATAG
AGAATTGTTTATTGTTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F08371g_CDS-001

Protein length: 833 aa.
Product: Nucleolar protein, putative

>YALI0F08371g_CDS-001 MAKTSQLKRLKETLKKNDLTGQTNVKGNKKKMNSGKNRQDRDKVLSDIRQQFNPFDVKVA
RKKHDIGGRTVRGSVGRPGLSKLSGEEARMEARKLELQNKGRVGGVFDRRFGEGDSNMNP
EEKMLERFTRERQLRSMGGGRNKSIFALDDDDDDADADMMLTHSGQALDFKDDFDQGDLG
IEAEEDEEMAAILANRRKLAEERGMGAMGVNLEEMDGVDMEEAGTGRKKSKEEVMKEIIA
KSKFHKAERQAARDKDQAIIEEMNDEDTMNALIRELGSIKAKKVVTALDQKEKEYDQNFR
NMILDRRAKPQDRTKTDEELAKEEAEKLKKLEDERQARMRGEVAIDQGEGDDLDGNVAFD
FENSEEEGEDDEDEAEDDDDEDVEIHEVDEDEDESGDKSGDESGEEETTKSEPASKSSSS
TLAYTFPIPKSHKMFLETTSAYPLDQLPTIIDRINVLHHASLKEGNKERLAKFACVLIDH
LMYLADEEEEDDFECLSEVVAKVHTLAETHSPTMAAHIRKKLEAHQADTTVTAGHLMLWT
LIGMIFSTSDHFHLVVTPAVLVMTRFLSLSTFDSIPKCIAGLYTAQLLIQYQRIAKRFIP
EIAVFLGRLIAALEGTETSLPMASLFKIAPIKGFTPGKASHKSTDKTISMRSANRSILSK
KEVATLSQELHNQAVFSVSKLMDTYKDISAFPETFEFCENIPELADKYSRITKFKLADRK
PLTLHKHRPLAIKTMAPKFEENFNVDKKSYNPDMALQETQKLRAELKKEKKSALREIRKD
AAFEAREKIRERREKDDAYHEKMARLVRSVQTEEGAEKNAYERERASRKRKR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG