YALI0F08349g

Overview

Description some similarities with uniprot|Q12142 Saccharomyces cerevisiae YDL149W PG9 integral membrane protein required for Cvt and autophagy transport
Locus type CDS
Locus tag YALI0F08349g

Location

Species Yarrowia lipolytica Positions 1172830..1175226
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 2397 (nuc.)
Previous locus YALI0F08327g Next locus YALI0F08371g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F08349g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F08349gYALI0F08349g_mRNA-001YALI0F08349g_CDS-001

Nucleotide sequence

 

>YALI0F08349g
ATGACGGACAAGAGCACGTTTCTCTCGGTGCTGTTCGGCGGAGGATCCGTGTACCAGGAT
CTGGACGGCGACGGCGAGGTCGAGGACGCCGAGATTCTGAGACGCGTCGAGGAGGAACAC
GCCCAAACCAGCGACAACAGCAACAGCGACAATGATAGCGGAAACGACAGCGACGTTCCG
ACTTCTCTGATGGTCGAAGGGGTCCAGGACCCAAAACCAGGCTCAAAAAGACGTCAGCCA
CATAGGATGGCCACACTATCTAATTTGCAAAGTTCTGCAGGACCAGGAGCAAGATCGGTG
AGTTTCGCCCAAGGAACGAAAACACAGACGCCGATCCGTCTGACAAAGCCAACAGGCGTA
GCAAACGGCGGACTACCTCGTCACAAACAGGATCTGGGCGCCTCTATTCGGACCATGGTG
GACCCCAAGGAGTTAGCTCTATGGAAGTGGGCCAATGTCCAGAACCTCGACAACTTCTTT
GCAGAAGCATACATGTACTACACAGGCAAGGGACTGGTGTCCATCATCTTGTCTCGCGTT
CTCAACATGTCCACCATTATGTTTGTGGTTGTTTTCAGCACCTATTTAGGCAGTTGTATT
GATTACTCCAAGATCAAGGGCTCTCGCACGCTGGACGAGGTGCACGTGAAACAGTGCTAC
GCCAAACTCGGCTCTTTCCACGTGTTTGTGCTCTGGACTTTTTTTGTGCTGTGGTTCATG
AAACTGTTCCAGTACGTCAAAGACATTCGACGGCTGGTAGACATGAAGTCGTTCTACCAG
GAGCTGCTTGAAATCGACGAGAACGAACTACAGACCATTTCTTGGCCTCAGGTGGCAAAA
CGCATGGCAACATTGTCTGAAGCAAATGCTGCAACCCAAGTGGGCAACAGTACGAAGCAG
AGAATCGAGCCTCATGATATCGCCAACCGAGTCATGCGAAAAGAAAATTATCTTGTGGCA
ATGTTCCATAAGCGGGTGCTCAACATGACTGTCCCGCTTCCACAGCCCCTGCAGCGCATC
TTTGGACGGCCTCAGCTGCTCAGTCGAGCTCTGGAGTGGAATCTCAGTCTGTGCATTCTG
GACTATGTATTCAACCCGGCCGGACAGGTTAGACCCATGTTTCTCAAGTCGACACACAAA
CAGATCCTGTCCACAGGTCTACGACGTCGGTTTGTATTTGCAGCTATCATGAACGTTGTC
TTTGCACCCTTCATTATTCTCTATCTTGCGCTGCTGTATTTCTTCCGATACTTCAACGAG
TACCACAAGAACCCAGCATCGATAGGAACTCGAAGATACAATCCCCTGGCCGAATGGAAA
CTCAGAGAATACAATGAACTGCCCCATCAGTTTGAGAGACGCCTGACTCTGTCGTACATT
CCTGCCTCCAAGTATCTGGATCAATTTCCCAAAGAGAAGACTGCACTAGTCAGCAAATTC
GTGTCTTTCATTGCGGGCTCTTTTGCGGCGGTACTCGGTATTGCATCTCTCATTGACCCT
GAGCTGTTTCTCATGTTTGAGATCTCCGCTAACCGCACGGTGCTGTTCTACATTGGAGTG
TTTGGATCGATTCTGGCTGTTTCTCGGTCGCTGATTCCTGAAGAGACGCTTGTTTTCGAC
CCAGAAATCTCCCTAAGATATGTGGCTGAATTCACACATTATCTGCCGCCGGAGTGGGAA
GGGAAACTCCACACAGAACAGGTCAAAAATGAGTTTTCGCTCATGTACGAGATGCGACTC
ATTATCTTGCTCAAGGAGCTAGCCAGCATTTTCCTAGCCCCCTTCATTCTCTATTACTCG
CTCACCCAGTCCTGTGACGATATTGTGGACTTTATCAGAGACCATTCTGTGCATGTGGAT
GGCCTGGGCTATGTGTGCACTTTTGCCATGTTTGATTTTAAGCAAAAGTCGCCCGACCAC
CAGCCTGACGAGGACCAGAAAATGCTCAAGTCGTATTTATACTTTATGGACCACTATGGA
GACAAGCCGACCAACGTGTCTCAGACCCAGCAAAATGTGCCCATGTACTCGTCTGTGCGT
CTCAAGAATGACGGGCTGGATCTTAACAACTCCATTATGCAAAAGTTCCAGAAACACAAC
GGTCACCATGCGCTTTCTGGTCTAACTCAGCGGGATGTGGGGCTTTCTCCTGCTGCTCCC
ACGGCTACTACTGCCACATCAGGAACAGCCACCGGAGCCGCTCCTCGAAGAGATCTTATC
AACTTCGATGTCGACGAGTCGTTCATAGATCAGACGACTTCAAACAGAGACATGGACAAT
GACGAGCAGCCCAAGGACAAGGAACGAGTGGTGGACATGCTCAACCAGTTTTACAAGAAG
ACCGACAACATGAACCTGGGCGCCTGACTTAATGCATTTATTTATTGACTTGTGTGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F08349g_CDS-001

Protein length: 789 aa.
Product: Conserved hypothetical protein

>YALI0F08349g_CDS-001 MTDKSTFLSVLFGGGSVYQDLDGDGEVEDAEILRRVEEEHAQTSDNSNSDNDSGNDSDVP
TSLMVEGVQDPKPGSKRRQPHRMATLSNLQSSAGPGARSVSFAQGTKTQTPIRLTKPTGV
ANGGLPRHKQDLGASIRTMVDPKELALWKWANVQNLDNFFAEAYMYYTGKGLVSIILSRV
LNMSTIMFVVVFSTYLGSCIDYSKIKGSRTLDEVHVKQCYAKLGSFHVFVLWTFFVLWFM
KLFQYVKDIRRLVDMKSFYQELLEIDENELQTISWPQVAKRMATLSEANAATQVGNSTKQ
RIEPHDIANRVMRKENYLVAMFHKRVLNMTVPLPQPLQRIFGRPQLLSRALEWNLSLCIL
DYVFNPAGQVRPMFLKSTHKQILSTGLRRRFVFAAIMNVVFAPFIILYLALLYFFRYFNE
YHKNPASIGTRRYNPLAEWKLREYNELPHQFERRLTLSYIPASKYLDQFPKEKTALVSKF
VSFIAGSFAAVLGIASLIDPELFLMFEISANRTVLFYIGVFGSILAVSRSLIPEETLVFD
PEISLRYVAEFTHYLPPEWEGKLHTEQVKNEFSLMYEMRLIILLKELASIFLAPFILYYS
LTQSCDDIVDFIRDHSVHVDGLGYVCTFAMFDFKQKSPDHQPDEDQKMLKSYLYFMDHYG
DKPTNVSQTQQNVPMYSSVRLKNDGLDLNNSIMQKFQKHNGHHALSGLTQRDVGLSPAAP
TATTATSGTATGAAPRRDLINFDVDESFIDQTTSNRDMDNDEQPKDKERVVDMLNQFYKK
TDNMNLGA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG