YALI0F07887g

Overview

Description similar to uniprot|R4X9C1 Taphrina deformans TAPDE_002346 WD repeat protein
Locus type CDS
Locus tag YALI0F07887g

Location

Species Yarrowia lipolytica Positions 1125980..1127111
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1132 (nuc.)
Previous locus YALI0F07865g Next locus YALI0F07909g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F07887g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F07887gYALI0F07887g_mRNA-001YALI0F07887g_CDS-001

Nucleotide sequence

 

>YALI0F07887g
ATGACGACTCTCAAGGCACTGCCGCTCACGTGCTCGGGCCACTCACGGCCAGTCACACAC
GTGAGCTTTGGGGAAATTGAAAACCGCCCGTTTCTGATTTCCGCCTGTAAGGGTGAGTAC
TAGGAAAAGTGGACAACCGTGGACGCCAAAAGGGACGGCAAAGGACAAGCTAACCTAGAC
GCGCTACCCATTCTGCGCAATGGCGCAACCGGTGACTGGATTGGCACCTACTTGGGTCAC
AAGGGCTCGACCTGGTGTTCTCGGATGAGCCAGGGAGGAGATAGAGACAGCACGCTGGTG
TGCACCGCATCGGCCGATTTCACATGCAAAATCTGGCGCGCGGCCACCGGAGAAGAGCTG
CATAGCATAGAGCACCCCCACATTGTGCGGAGCTGCTGTTTTTCGCAGTCCGGCAAGCTG
CTGGCCACCAGTTGTCAAGATGGCCATGTTCGCGTCTATCAACTCAAGGACGACAAGTAC
CAACAGACACACTGCATCAAAACCATGTCAAAGACGGTGTTGTGGGTCCAGGACGCCTCC
GAGCCGCTACTGATAGTGTGCACATCCAAGGGCATTGAGTGGTGGAGTGTGAAGGACACG
TCCGAGCCCATGCTCAAGGGCCAGGTTTCGCTAGGGGACACTCCGGGGCCGTTTGAGATT
AGTGGTGGGCTTCTGGTTGGTCCGGCTGGAAACCAGGTCTATGTTCTGGACTCTTTGACA
AGAGAAGTGCTCAAGTGCCACAAGCTGGACTACAATGTATCTGCTGTGGCCGTGTCTCCG
GATCGAGATGTCTTTCAAACAGGCAACTCGGGGGATACGTGGGTTCGGGTGCACAGGTAT
GAGACCGGGGAGCTGGTGGACACCTGGAAGGGCCACCATGGACCGGTTCATACAGTAGCA
TATTCGCCCAATGGCGACATTTCGGCCACAGGAAGCGAGGACGGAACCGTCCGACTGTGG
AAAATTCGCGACGGTCCGTTTGGGCTCTGGAGATGAAGAGAATGATAATAATGAGGTGGA
GACTGCTGGGTAGCTCAATAGCGCGCATGTATCATAGTGAGAGGTGGAACCGGAACCAGC
AGTTTAAGAGAGGCGGCTACATAATAATTAATGGATGGAAGGAAGGGGATGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F07887g_CDS-001

Protein length: 310 aa.
Product: W40 domain containing protein

>YALI0F07887g_CDS-001 MTTLKALPLTCSGHSRPVTHVSFGEIENRPFLISACKDALPILRNGATGDWIGTYLGHKG
STWCSRMSQGGDRDSTLVCTASADFTCKIWRAATGEELHSIEHPHIVRSCCFSQSGKLLA
TSCQDGHVRVYQLKDDKYQQTHCIKTMSKTVLWVQDASEPLLIVCTSKGIEWWSVKDTSE
PMLKGQVSLGDTPGPFEISGGLLVGPAGNQVYVLDSLTREVLKCHKLDYNVSAVAVSPDR
DVFQTGNSGDTWVRVHRYETGELVDTWKGHHGPVHTVAYSPNGDISATGSEDGTVRLWKI
RDGPFGLWR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG