YALI0F07865g

Overview

Description some similarities with uniprot|O13297 Saccharomyces cerevisiae YPL228W (ohnolog of YMR180C) CET1 RNA 5'- triphosphatase (mRNA capping enzyme, beta subunit)
Locus type CDS
Locus tag YALI0F07865g

Location

Species Yarrowia lipolytica Positions 1122908..1124236
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1329 (nuc.)
Previous locus YALI0F07843g Next locus YALI0F07887g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F07865g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F07865gYALI0F07865g_mRNA-001YALI0F07865g_CDS-001

Nucleotide sequence

 

>YALI0F07865g
ATGGACATTGGCAAGATGATCAACGACGATAATGGGTCCGACTCGCGTCGCACCTCGGTT
AAATCGCTTCTCAACAGCCCACCCACCGGCCTACCGTCCAGTGACGACCGGCCAGACTCC
AAGGCCTCCAGCACCAGCGATTTGGCGCAACAGCTGACCAACGAGATGGAGAGCGGCGAA
GACGACGATGACGAAGACGCCGCCGCTGCGGTCAACCACAAGCCCCGCCGGTACTCACGG
CCTCCCATCTGGGCCACCAAGTGGCAGGGTACGGGGAGACATGCCGAGAGAGACCACAGA
CCTCCCCCTCACAGACAAGATCGACGAGACCCGAGAATGGAGCGGCAATCAGGGGGATCA
CGTGCCCTACCAGCTTCCTCCACTACCACCATCACAGGCTGTCCTCCATCGATATCGGGC
ATCAAGCCGTTTGAAAGCGTCACTCGAACGGTGACTTCATGGTTGCATGCTCATCTGTCC
ACCATGTCGCCGGAGCAGCTTCAGACGGTCGAACTGGAGGCCAAGATTGGTACTATTCAG
CACAAGAAGGCCGGCGCTGATCGGGCTCGGCTAGACCTGCCTATTGTCACCGAGGCCGTG
GTCAACCAGCAGTATGTCCAGGCCCAGTGTTCGTTCTCGTCACAGCTGCCCGAATCGCTG
CTGGAAGAGGCCAAGCGCATTTTGGACGCTGCAGACCCCAAGTTTATCAAGAGCACAGAG
CATACGATCCACAGAGATGAAATTTACGAGGGTCAACAAGATAAGGGCAATCTGAGAATC
ACACGGGACGATGTCACAGGCAGACAAGTGGCCAAAATCAGAAAAAAGGCCATTGCTCAC
ATTATGATCCATTGCCCCACAGACCCATTTGACATTCGTCTGTCGCTAGCTACTGAAAGC
CCCACAGACGACGTTCCTCAGGGAGTGTGTCGAACACGCCGAAAGGACCGAATTTCGTAC
CTTTATGACGGTTTCCGAGCAGACCTGACCAAGGTGTCTGGCTCCTCCATGTCCTCCGAG
TTGGAAATGGAGGCCGACTCCCACAAGCTCATTGGCTACTTTACCGACAGAAACGACCCC
CACAACATGGACAAGGTAGAGGAGCTGCTGCAGATTCTGCTGGACTCCATGCGGTATGTC
AACCGGCGGCTCAAGGCGTAGGCTTATGTATATTAATATTTATAGATCGAACCGATCCAA
CAGAAGAGCGGGGCTCTATCTAGCGTTGGGTTGAAGTGGTGCCAGTTGGTGATCTGAGTA
GGAACCAATGGTGGGTAAAGGGAAGGGTTATTTAGCGCCTACGTAGGGAAGTAGTGTGAA
GGATCATCC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F07865g_CDS-001

Protein length: 387 aa.
Product: Conserved hypothetical protein

>YALI0F07865g_CDS-001 MDIGKMINDDNGSDSRRTSVKSLLNSPPTGLPSSDDRPDSKASSTSDLAQQLTNEMESGE
DDDDEDAAAAVNHKPRRYSRPPIWATKWQGTGRHAERDHRPPPHRQDRRDPRMERQSGGS
RALPASSTTTITGCPPSISGIKPFESVTRTVTSWLHAHLSTMSPEQLQTVELEAKIGTIQ
HKKAGADRARLDLPIVTEAVVNQQYVQAQCSFSSQLPESLLEEAKRILDAADPKFIKSTE
HTIHRDEIYEGQQDKGNLRITRDDVTGRQVAKIRKKAIAHIMIHCPTDPFDIRLSLATES
PTDDVPQGVCRTRRKDRISYLYDGFRADLTKVSGSSMSSELEMEADSHKLIGYFTDRNDP
HNMDKVEELLQILLDSMRYVNRRLKA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG