YALI0F07469g

Overview

Description highly similar to uniprot|P21242 Saccharomyces cerevisiae YOR362c PRE10 20S proteasome subunit C1 (alpha7)
Locus type CDS
Locus tag YALI0F07469g

Location

Species Yarrowia lipolytica Positions 1076778..1077619
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 842 (nuc.)
Previous locus YALI0F07447g Next locus YALI0F07491g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F07469g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F07469gYALI0F07469g_mRNA-001YALI0F07469g_CDS-001

Nucleotide sequence

 

>YALI0F07469g
ATGGTAAGTAGTCTCCAAACACCGCTGCGGGCCCATCAACCAACTAACACAGTCCTCAAT
CGGAACAGGATACGATCTCTCTAACTCCGTCTTCTCCCCCGACGGTCGAAACTTCCAGGT
GGAGTATGCCAGCAAGGCCGTTGAGAACGGCTCCACCTCCATTGCCATCAAGTGCAAGGA
CGGCGTTGTTTTTGCGCTCGAAAAGATTGTCACATCTAAGCTGCTTGTTCCCGGCGCCAA
CCAGCGAATCCAGACCGTCGACAAGCACATTGGTGTTGTGTACTCTGGTCTGGTCCCCGA
CGGACGACACATGGTCAGCAGAGGCCGATCGGAAGCCTACAATTGGCGATCCACCTACAA
GCAGGCCATCCCCGTGGACTCCTTTGCCGACCGACTCGGCTCCTACACCCAGGCCTACAC
GCTGTACAACTCGGTGCGTCCATTTGGCATCGCCACCATTCTTGGAGGAGTGGACGAGGA
CGGACCCCATCTGTTCATGATCGAGCCCAGTGGGTCTTTCTGGGGCTACCACGGAGCCGC
CGCTGGAAAGGGCCGACAGACCGCCAAGAACGAGCTGGAGAAGCTGGATCTCCCCAACAT
CAGCGCCCGAGACGCCGTCAATGAGGCTGCCCGAATCATATACCTGGCCCACGAGGACAC
CAAGGACAAGGAGTTTGAGCTGGAGATCTCTTGGGTGTCGGCTTCTGAGACCGGAGGCAA
GCACCAGCATATTAGCGCCGAGCATCTTGCTGAAGCAAAGAAGTTTGCCGAGCAAGCAAC
GTCTGATGAGGATGATATGGAGGAGTAAGATAGTAAGATAGAAATGGATTTTATGAAGCA
AG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F07469g_CDS-001

Protein length: 253 aa.
Product: 20S proteasome subunit alpha 7, putative

>YALI0F07469g_CDS-001 MSSIGTGYDLSNSVFSPDGRNFQVEYASKAVENGSTSIAIKCKDGVVFALEKIVTSKLLV
PGANQRIQTVDKHIGVVYSGLVPDGRHMVSRGRSEAYNWRSTYKQAIPVDSFADRLGSYT
QAYTLYNSVRPFGIATILGGVDEDGPHLFMIEPSGSFWGYHGAAAGKGRQTAKNELEKLD
LPNISARDAVNEAARIIYLAHEDTKDKEFELEISWVSASETGGKHQHISAEHLAEAKKFA
EQATSDEDDMEE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG