YALI0F06314g

Overview

Description highly similar to uniprot|P23639 Saccharomyces cerevisiae YML092c PRE8 20S proteasome subunit Y7 (alpha2)
Locus type CDS
Locus tag YALI0F06314g

Location

Species Yarrowia lipolytica Positions 936034..937539
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1506 (nuc.)
Previous locus YALI0F06292g Next locus YALI0F06336g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F06314g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F06314gYALI0F06314g_mRNA-001YALI0F06314g_CDS-001

Nucleotide sequence

 

>YALI0F06314g
ATGGCAGCAGATAGATATTCGTTTTCACTGACAACATTTTCCCCCAGGTGAGTATGGGAA
CACGTGACGGACCAGAAGGTCATTGCGCAAAAAAACCGGACGATTTGAGCAACACACGAC
TTACCCGACGATGGTTAAGGACCACAGAACGATAGGAAGGCATGTTGAGGCACAGGGTGT
GTGATTCAGGTTACATCAGTATTGTTGGGACTGTCCATTCAACTCTGGGTATCAATGTTT
GTCGTCCGAGAAGTTTGATTGCTGTTAATTGATGTCTTGAGAATGTCACCATTCACAGTG
ATTCACAGTGTTCACAAGACGGAACCACCGAGGACGAATCGGGCGATAGAACACGAAGAT
GGAGATCAAAAGGGGTTGAAACATCAGACAGCATATCGTTGACATCGGGAAGTGTCATCG
GTGGCGTTGTCTGACAGAGATGATGGTATCCAATACCATGGTCACCATTGAGCACTGCAT
TGCCACAGCGATGAAGTTCAGTGGTTGATGCTTCCATGACTACCAATACTTCCACTAGTC
TAAGACTTGTGGCGCACATACTCCCCACGTCCCGCTGTTTCCGTGACGGATGCTGTTTCC
GAGTCTATGGCACTCTGACCTTAGCTCCTTTCCTTTCAGTACTAACTCAGTGGAAAGCTC
GGACAAATCGAATACGCCCTTGCGGCTGTCAACCAGGGAGTCACCTCTCTCGGTATTAAA
GCATCCAACGGCATTGTGCTCGCTACCGAAAAGAAAAGCGCTTCGTCTCTAGTCAACTCA
GACTCGCACTCGAAAATCGAGCTCATCACACCCGACATCGGAATGGTGTACGCTGGCATG
GGTCCCGACTTCCGAGTGCTGGTCGACAAAGCCAGAAAGGTCGCCCAGACCTCTTACAAA
CGAGTTTATAACGAGTACCCCCCCACTCGAATGCTGGTTCAGGAGATTGCCAAGATCGTG
CAGGAGGCCACTCAGTCTGGAGGAGTGCGGCCCTACGGAGTGTCACTTCTTGTGGCAGGT
CATGATGAGCACAACGGCTTCACTCTGTACCAGGTTGATCCCTCAGGGTCGTATTTCCCC
TGGAAGGCCACTGCCATCGGCAAAGGCTCTACTTCTGCCAAGACTTTCCTGGAGAAGCGA
TGGAACGAGGAGTTGGAGCTGGAGGATGCCATCCACATTGCTCTGCTAACTCTCAAAGAG
TCTATTGAGGGCGAGATGAACGGTGACACTGTGGAGATTTCCATCGTCTCCAACCCCGCT
GACCATCTGCTTGGATTCGAGGGTGTGGCTGGTGCCGTCGGACCTCGTTACAGAAAGTTG
ACTCCTCAGGAGATTGAGGACCGTTTGGATACTTTGTAGGGAGTTTATAAGGCAAGTTAC
AGAGGTGAGCTGCGCGTGACTGATACGTATACAACTCGTTCATGAGTGCTCGTGGCTACA
GGAATGGTATGTACTGAAGGATATTATATTGATGGAAGAACGCATGGCAGGCCATGGTGA
ACAGCA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F06314g_CDS-001

Protein length: 252 aa.
Product: 20S proteasome subunit alpha 2, putative

>YALI0F06314g_CDS-001 MAADRYSFSLTTFSPSGKLGQIEYALAAVNQGVTSLGIKASNGIVLATEKKSASSLVNSD
SHSKIELITPDIGMVYAGMGPDFRVLVDKARKVAQTSYKRVYNEYPPTRMLVQEIAKIVQ
EATQSGGVRPYGVSLLVAGHDEHNGFTLYQVDPSGSYFPWKATAIGKGSTSAKTFLEKRW
NEELELEDAIHIALLTLKESIEGEMNGDTVEISIVSNPADHLLGFEGVAGAVGPRYRKLT
PQEIEDRLDTL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG