YALI0F05940g

Overview

Description similar to uniprot|Q01532 Saccharomyces cerevisiae YNL239w
Locus type CDS
Locus tag YALI0F05940g

Location

Species Yarrowia lipolytica Positions 878373..880058
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1686 (nuc.)
Previous locus YALI0F05918g Next locus YALI0F05962g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F05940g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F05940gYALI0F05940g_mRNA-001YALI0F05940g_CDS-001

Nucleotide sequence

 

>YALI0F05940g
ATGGGCTCCTCTCCCTCCAAACAAGCCCAATCGGACGCGCAAAAGTCGCTAACCCGGCTG
TCCAAGGTGTCTGAAAAGCACTTTTATCCTGACACCGCCACTCCCGACTTGGCCACTCTT
CCTCAGCTACAATCCCTGCCGGATATTGACGGTCTGGATCTCAATGGAGACAACAACGAG
AAAGACATTGCCAACCTGCTGTCTGAGTGGCGAGCCAACTTCCTGGACTCTCCCAAGAAC
CGTCTGGCTCTCGCAGCTCTGTCCAGAAGTGACTACCAGTCGTTGCTGATCCAAGACGAC
AGATACAATGACCAGAACCCTGCTGTGTTCACTCACGTGATCAAGTACGACGGCCAGAAA
GACACCCCCGTGACCAACCAGCGCTCTTCAGGAAGATGCTGGCTGTTTGCCTCCACCAAC
GTGTTCCGAGTCCAGCTCATCAAGTCGTCAGCCATTAAGCCCAAGGACTTCCAGTTCTCC
CAGGCGTATCTCTTCTTTTACGACAAGCTGGAGAAGGCGTCGTATTTCCTGGAGCAGATC
ATCGACACCGCCGACGAAGATCTCGACTCTCGACTGGTCCAGGAACTACTCAAGGCTCCT
GTCAACGACGGAGGACAGTGGGATATGGTTGTCAATCTGGTAGAGAAGTATGGTCTGGTG
CCTCAGGACGTGTTCCCCGACTCATGGAACGCCCAGAACTCCGGCCATCTCAACTACTTG
CTTACTAACAAGCTGAGAGAGTACGGTCTGGCTCTCCGAAAGCTCATCCAGACCGAAAAA
CCTACCCCTGAGCTGCTACTCTCCCTGCGACGACAATACACCCAGAACGTGTACAACATT
CTTGCTACTTCTCTGGGAGTGCCTCCTGCTGCTAACGAGACCTTCAAGTGGGACTACTGG
ACCATTGATGGCAAGCCCCAGCAGGTCACCACCACCCCCATCAAGTTCTACAGAGACAAT
CTCAAGCACCCCGCCTCGCAGTACTTTTCCCTCATCAACGACCCTCGAAACGACTACAAG
CAGTTGTATACCGTTGACCGGCTTCAGAACATTTCTGGAGGCCGTCCCATCACCTACGTG
AACGCCGACATCTCCGAGCTCAAGAAGGCCGCCATCAAGATGATCCAGAACAACGAGCCT
GTCTTTTTTGGTTCTGACGTGGGCCAGTTTGGAGACCGAGCCACCGGTATTCTGGATCCC
AAGTCGTGGGATTACGATCTGGGCTTCAACACTTCTCTGGGAATGAATAAGGAGCAGCGA
GTGTCCACTGGAGCGTCGTCCATGACCCATGCCATGGTGATTACCGGAGTCCATCTTGAG
GACGGAGTACCGGTTAAGTGGAAGATTGAAAACTCGTGGGGAGCTGACACCGGAAAGAAG
GGCTATTTCCAGATGTCGGATAAGTGGTTTGACGAGTACGTGTTCCAGGTTGTTTCTTCT
GCCCAGTACGTTCCCAGAGAGCTTCAGCAGGTGCTCAAGACCAAGCCCAACGTCCTGCCT
CTGTGGGATCCCATGGGAGCCTTGGCCTAAGTGGGGTGTGAGTCTAGTGTTAGATATAGC
TGGTCTATGTGATGAGTTGTGATGAGATGCGGCGAGATGAATAATAAAGTGGTAAAGACG
AGTAATCGTACCACAAACGCAAAAGCAAGTACAAGAAGAGCAAGTACAAGAAGAGCAAGT
ACAAGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F05940g_CDS-001

Protein length: 510 aa.
Product: Cysteine aminopeptidase with homocysteine- thiolactonase activity, putative

>YALI0F05940g_CDS-001 MGSSPSKQAQSDAQKSLTRLSKVSEKHFYPDTATPDLATLPQLQSLPDIDGLDLNGDNNE
KDIANLLSEWRANFLDSPKNRLALAALSRSDYQSLLIQDDRYNDQNPAVFTHVIKYDGQK
DTPVTNQRSSGRCWLFASTNVFRVQLIKSSAIKPKDFQFSQAYLFFYDKLEKASYFLEQI
IDTADEDLDSRLVQELLKAPVNDGGQWDMVVNLVEKYGLVPQDVFPDSWNAQNSGHLNYL
LTNKLREYGLALRKLIQTEKPTPELLLSLRRQYTQNVYNILATSLGVPPAANETFKWDYW
TIDGKPQQVTTTPIKFYRDNLKHPASQYFSLINDPRNDYKQLYTVDRLQNISGGRPITYV
NADISELKKAAIKMIQNNEPVFFGSDVGQFGDRATGILDPKSWDYDLGFNTSLGMNKEQR
VSTGASSMTHAMVITGVHLEDGVPVKWKIENSWGADTGKKGYFQMSDKWFDEYVFQVVSS
AQYVPRELQQVLKTKPNVLPLWDPMGALA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG