YALI0F05918g

Overview

Description similar to uniprot|Q08208 Saccharomyces cerevisiae YOL041C
Locus type CDS
Locus tag YALI0F05918g

Location

Species Yarrowia lipolytica Positions 875608..877191
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1584 (nuc.)
Previous locus YALI0F05896g Next locus YALI0F05940g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F05918g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F05918gYALI0F05918g_mRNA-001YALI0F05918g_CDS-001

Nucleotide sequence

 

>YALI0F05918g
ATGACCACCACAAAAGACAACTCCGGACTCGCCGCGCTCTTTGCCAACTCCAGTGGTCCT
CGTCAGAAGCCTCAGCGCGCTGGCAAGGTCGACCCGGTGCGTGACCAGCAAGAGGATAAG
ATGGAAGTAGAGGATGAAGAGGAGGATGAAGAGGAGGACGAAGAGGACGAAGAGGAGGAT
GAGGAGGATGAGGAGGATGAGGAGGAGAAGGAGGAGGACGACGACGACGACGACGACGAA
GAGGAGATCGAAGAGCCTGTTATCAAGAAGAGCAAGAAGAACAAAAAGTCCAAGGAGGAG
TCGGCCGACTTGGAGGATCAGTACATGGCCAAGTTGGCCGAGGAGGTGGCCGAGGAGAAG
CCCATGGTCGCAGAGACCTCCGCGGAGGAAATCAAAGTCGATGAGCCCGAATCCGATTCT
GAGGACGAACCCGAGCTGGACGTGGACGAAGAGACCAAGAAGAAGCTGGAGGCCACCAAC
AAGGAGCTGGACAAGGCCGACTACACCATTTTTGTCGGCAACGTGTCGTCCGAGGTGATC
ACCGACAAGACCGTGTACAACAACTTCAAGGCTCTGTTTGCGGCCATTGGAACCGTGGCG
TCTGTGCGGTTCCGGTCCATCTCCTTCTCCAAGCTGCTTCCTCGAAAGGTGGCTTTCATT
TCCCAGCAGTTCCACTCCAAGCGAGACACGGTCAACGCTTACATTGTGTTCAAGAACGTC
AAGTCCGTCAAGGGCGCTCTGACGCTCAACGGCTCGGTTTTCAAGGGCTTCCACATGCGA
GTCGACTCCGTGGCCCATCCCGGCGCCCAGGATCACAAGCGGTGCGTGTTTGTGGGAGCT
CTGGACTTTGAGGAGCAGGAGGAATCCCTTTGGGAGGCCTTTTCGTCTTGCGGTGATGTG
GAGTACGTGCGAATTGTGCGGGACCCCAAGACCAACGTTGGCAAGGGGTTTGCATACGTG
CAGTTCAAGGACGTCAACTCGGTTGAGCAGGCTCTGCTGCTCAACGGTAAGGGCATCAAC
GAGCTCTCCAAGTCCACCACTAACAAGCGCAAGCTGCGTGTGTCGCGGGCCAAGAGCCAA
CACTCCCAGGAACGGGCCAAGCAGGCCGACATGAAGAACATTCGAAACGCAAAGACCGAA
GGCCTGTCCCGAGACGAAAAGTCGCACTTTGGCCGGGCCCAGTCGCGGCTAGGCAAGGCC
GGCAAGGCTCAGCTACAGTCCATTGTACAGGAGGGTCTGCGGGCTAAGAAAGAGGACGGC
AAGGTCAACCTGGCCCGAAGCAAGCGACGAGGAGTCAAGCCCAACAAGAACCGAGTCGAG
AAGCCTGGCCAGTCCAGAGCCGAGAAGCGAAAGGCCATGTTTGGAACCCCCACCAACGGC
GCTCCCGGAGCTGGCGGCAAGAAGAAGCGTCTTACAACCCGATCCCAGAAGTTCAAGCAG
GATGGAGGTGTCAAAAAGGACGGAGACGCCAAGAAGGATGGCCCCAAGAAGGAGAGGGAT
GGCTCCAAGAAGGGTTCCAAGAAGAACTAATTGGGTAGAGGTTGTATAGGTGAAAATAAA
TAGGCATTAGATTATTGTATTGTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F05918g_CDS-001

Protein length: 510 aa.
Product: Nucleolar protein involved in pre-25S rRNA processing, putative

>YALI0F05918g_CDS-001 MTTTKDNSGLAALFANSSGPRQKPQRAGKVDPVRDQQEDKMEVEDEEEDEEEDEEDEEED
EEDEEDEEEKEEDDDDDDDEEEIEEPVIKKSKKNKKSKEESADLEDQYMAKLAEEVAEEK
PMVAETSAEEIKVDEPESDSEDEPELDVDEETKKKLEATNKELDKADYTIFVGNVSSEVI
TDKTVYNNFKALFAAIGTVASVRFRSISFSKLLPRKVAFISQQFHSKRDTVNAYIVFKNV
KSVKGALTLNGSVFKGFHMRVDSVAHPGAQDHKRCVFVGALDFEEQEESLWEAFSSCGDV
EYVRIVRDPKTNVGKGFAYVQFKDVNSVEQALLLNGKGINELSKSTTNKRKLRVSRAKSQ
HSQERAKQADMKNIRNAKTEGLSRDEKSHFGRAQSRLGKAGKAQLQSIVQEGLRAKKEDG
KVNLARSKRRGVKPNKNRVEKPGQSRAEKRKAMFGTPTNGAPGAGGKKKRLTTRSQKFKQ
DGGVKKDGDAKKDGPKKERDGSKKGSKKN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG