YALI0F05258g

Overview

Description similar to uniprot|P40481 Saccharomyces cerevisiae YIL110w
Locus type CDS
Locus tag YALI0F05258g

Location

Species Yarrowia lipolytica Positions 786787..788068
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1282 (nuc.)
Previous locus YALI0F05236g Next locus YALI0F05280g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F05258g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F05258gYALI0F05258g_mRNA-001YALI0F05258g_CDS-001

Nucleotide sequence

 

>YALI0F05258g
ATGTCCTTCTCATTCGGATTCTCCGAGGAAGGTGAAATCAACGCCCCCAAAGTCGACACA
AATGCCGTCAAGGCGTTCATGGACTCGCAAATGGACATTTCTCCAGACTTTATGCCCAAG
AAGTACTCCTTCCGAATGATGCTGGAACGGGTCATGGGAAAACGTCTCACTTACCAGCCT
CTGCAAATCTCTGCAGACACACAACTTCTTCGCCGAGAGCTCTATGACGTCAAGCATCAG
CTGATGGGCGAGGATAACCTGTCAGCCACCGACGAACTGCTTCTGGGCACCACTAACGAG
GATCTCAAGGTTGCGACCTACGAGGGAGGTCTCAAGGCCTGGGAGTGCATGCTGGACCTG
ACCAAGGTGCTGGAGGGTTGCCAATGGACCCAGGGCTCGGCTATTGAGCTGGGATGTGGC
CAGGGACTGCCTGCTATTTATCTGATTCAAAGACTGCTCAAGTCTGGAAACCCGGGAAAA
GTCACTCTGGCAGACTACAACGACTCTGTGCTGGGCTTAGTGACTGCCCCCAACGTGCTA
CTCAACCTGTGCAACTTGCTGACGGTTGAGGAGCTGTCTGCGCTGCAGACTACAAACGAA
GATGCCGCCGAGGGTCAGACTAGAGTGCAGGAGGGAGAACTGGATGTGACAAGTGCCCTA
GTGGACCGAATCGAGCAGTTGTTGCAGGAAAAGGGCGTTGAAGTCGAGTTTGTGGCCGGG
GCTTGGAGCCCCGAGTTTGTGCGGCTCGTCGGACTGTATAGTCTTGTTCTAGCATCTGAG
ACCATTTACTCGTTGGATACGCTCCCTGTGTTCACCAATACTCTGCTGAACATTACCGAG
GATGGAGGAGATGTGTTGGTGGCGGCCAAGAAGGTGTATTTCGGAGTAGGAGGCGGCATT
CATGAGTTTGAGACATTGTTGAGCGAGAGAGGTTGGAAGTTGGACGTGGTGGCAGATATT
GACGACGCTGGAGTTGCAAGAGGAGTTTGGACGGTGAAGCAATGAGCGTAGCGAGCGGTT
CACTACGGCTAGTGGACATGAAACTAATGCATACTGGTTGAGTCGGGAATGTATCAACTA
GAAGTATCGTAACTATACGATCCAAACTGTGACATTTACAAGACCAACTGGAATCGACTG
GTGGTCTTGGATGTTGTATCTGACGACGGGAAGCCAATATTTTGGGGATGCAAAGCACTG
TGAGGATACAATAGTTGACAGATGATCTAATGTCTACCTGCGGATGCCGTTTATAAAGCA
ATAAATAATGTATTAATGTTGG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F05258g_CDS-001

Protein length: 335 aa.
Product: AdoMet-dependent methyltransferase, putative

>YALI0F05258g_CDS-001 MSFSFGFSEEGEINAPKVDTNAVKAFMDSQMDISPDFMPKKYSFRMMLERVMGKRLTYQP
LQISADTQLLRRELYDVKHQLMGEDNLSATDELLLGTTNEDLKVATYEGGLKAWECMLDL
TKVLEGCQWTQGSAIELGCGQGLPAIYLIQRLLKSGNPGKVTLADYNDSVLGLVTAPNVL
LNLCNLLTVEELSALQTTNEDAAEGQTRVQEGELDVTSALVDRIEQLLQEKGVEVEFVAG
AWSPEFVRLVGLYSLVLASETIYSLDTLPVFTNTLLNITEDGGDVLVAAKKVYFGVGGGI
HEFETLLSERGWKLDVVADIDDAGVARGVWTVKQ*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG