YALI0F05236g

Overview

Description some similarities with uniprot|F2RQ35 Trichophyton tonsurans DASH complex subunit Dam1
Locus type CDS
Locus tag YALI0F05236g

Location

Species Yarrowia lipolytica Positions 785945..786817
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 873 (nuc.)
Previous locus YALI0F05214g Next locus YALI0F05258g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F05236g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F05236gYALI0F05236g_mRNA-001YALI0F05236g_CDS-001

Nucleotide sequence

 

>YALI0F05236g
ATGCAACGACCCACAACACCATTAAGACGCTCAAATTCGCGACAATCGGACCACGAAGAG
CACTATCCGATAGTGGAGTCCGTGTTGGACATGGCTATCGGCGAACAGATGGCCGAACTC
GCAGACGGCATGTCAGCGCTAGACCGCAATCTCAAGGACCTCCAGGTGATCCATACCAAC
CTCAATAACTTCAACGAGTCGTTCTCGACACTGATTTACGGGCTCCAGATGAACGCGTGG
TGCGCCGAGTTCCATAACGGACCACGTTCGTGCGATTTTGCACGCCGAAAAGAGGTGGAA
GAGATGGAAGAAAGAGCTCGACGGGCACAGATGCAAGCGGAACGCGACAGAATGGCCATG
CAACAGATCCAAGAGACCCCGACGCGTCTGCCGAGCGAACCATCGGACGGAGATGTCACG
TACATGCGCAACGACAACTCGTTCATCATTCAGCCTCCTAGCAGTTACCAGTCTCAGCTG
CCCAGTAGGATTCCCCAGTCGTCACGTGCGTCGAGGATTCGACCTCCGAACTCACTGAGA
CCACCAAGAGGACGGGGGTTGTATCTCAGAGGAGGGTCACGTGGTGTGACGGGAGGAAGA
GGGAGCTATACGGGAGTTGGGAGGGGTAGTGGTAGGCCAGCTAGTGAGGGTACTACCAGG
CGGTGGCTATGAGCAGCGAACTGATCACGCTACTTGTGGTTGATTTGACTGCTTGAAGGT
CAATTGGTTATGAGTTTGAGTGTGCAGAGCACGTTCAAACAACTATGGTGGATCTATCTG
GTATCAGATGTTTCTCCGCTCACAGCTCCACCTACTCCACCCACAACTCATGATTTATAG
ACCCAACATTAATACATTATTTATTGCTTTATA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F05236g_CDS-001

Protein length: 224 aa.
Product: Conserved hypothetical protein

>YALI0F05236g_CDS-001 MQRPTTPLRRSNSRQSDHEEHYPIVESVLDMAIGEQMAELADGMSALDRNLKDLQVIHTN
LNNFNESFSTLIYGLQMNAWCAEFHNGPRSCDFARRKEVEEMEERARRAQMQAERDRMAM
QQIQETPTRLPSEPSDGDVTYMRNDNSFIIQPPSSYQSQLPSRIPQSSRASRIRPPNSLR
PPRGRGLYLRGGSRGVTGGRGSYTGVGRGSGRPASEGTTRRWL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG