YALI0F05104g

Overview

Description weakly similar to uniprot|P39933 Saccharomyces cerevisiae YPR186c TFC2 TFIIIA transcription initiation factor
Locus type CDS
Locus tag YALI0F05104g

Location

Species Yarrowia lipolytica Positions 769917..771948
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 2032 (nuc.)
Previous locus YALI0F05082g Next locus YALI0F05126g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F05104g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F05104gYALI0F05104g_mRNA-001YALI0F05104g_CDS-001

Nucleotide sequence

 

>YALI0F05104g
ATGTTTCACGAAGCAGAATTGTCGGATACTCCAGATGGCATCACGCACTATGACCTTCCG
TCCCGGCCAACGTCCGCGGCGTCTTCGGCGTCGTCGCCGGTGTCCTCCGAGTGGATTGAG
GTGAAGGACGCCCATGGCAACCCCAAACGAGTGCCAGAACGCAAGGGTCTGTTTTTCCCG
ACCCGTGGAGAGACGTACGGCGATGCGTGGAACGGCAATGTGCCCAAGGAAAAAACCACC
GTCAAACGGACCCTGGCTCACGTCTGCCCCGAAGAGGGCTGTGACAAGGCATACAGCCGG
CCATCGCTCCTAAAACAACATCTACGGTCCCATTACAACGAGCGGTGCTTTGTGTGCACT
TATGAGGGCTGTGGCAAGGGCTTCTTCCGCCGCTCGCATCTCAAAGCCCACACAAACAGT
CACACGGTGGCCAAACGATACCACTGCTCGTTTTGCGCCAAGGGGTTCAACACGCGCCAG
CACCTGCTGCGTCATGAGGTGACCCACAAGTCGATAAAACACTGCCCACACCAAGACTGC
TCCAAGCAGTGTCGCACCGAGGTGCAGCTGCTGGAGCACTGTGTGGCCGACCACGCCACC
TGGAAGCACCAGTGTACCTATCCCGAATGTGGACGCGCTATTGGCTCCGAAAGACAGATG
CAATACCACTGGGAACGGGACCACAACCAAACGCCGCAGTACAAGTGTCCGCATGACGAG
TGCGAAGAGGTGGCCTCACAGTGGATCAAGCTGCAGAAGCATGTTTCAAAGGCGCACAAC
CGGTGGCTGTGTCACCATTGCGAAGGCATCTTTGACGACGTGCAGTCCATGTACGAGCAT
GAGAAGAGCGTGCACGGTCTGTCTGTTCTCTACAGAGGCGGCCACCGGACTCCAGGCTAC
GTGCGGCAACTCTGGACGTGCCCTGAAGAGTCATGTGGTCACCAATCCTTCGACAAGGAC
CTGTATGCCAAACACTACGTGTCGCACAACAAGGCCCCTGTTCGCGACATGTTTGAGTCG
GTGGCTGAGTACGACATTACACCCGAGATCATTCCGTACTTTGAAAAGCCCGAAAAGCTG
ACGCGAAAAGGCCGTTCAGAGCGAACGAGTCTGGAGGGCAAGTCTGGGGAAGAGGAGTAC
CAGTTGCCTAGCGAACGCCCAGCCAAACGACAACGGCGAGAGGTCTCCAAACCCACAAAC
ACCGCTGCCAGCATCGTCGACAAAATCACCGGAGCCGGCTACTCGGACTCTCGAACCATC
CCTTGCGTGGTCGAGACTTGTATGCATCGGTTCAACCGTAAGTACGATCTCGACCGCCAC
GTTGCTGCCAACCATGCCACCAACTGCGCCGTTTGTCCGTTTGGATCTCACATTCTCACC
GAGGTCCGAGACCACATGAGCGACGAACACCGCACCGAGTGGCCGGCAGAGTGCTACCAG
GCCTCCCCAGACGCCCACATCAAAATCCATCTTGCATACCTTCGTGGAGAGACGCCTGAG
GTTGAACCTGTTAACACTACCTCTCAGAACATGTACAAAAACCTGCATTATCCTACTCCT
GGACTGCGCAGAAACGCCCCCCGAGGACAGTCCAACTCCTCGTACAATAGCCCACTGCAC
AGCCCCATCATTCAGGTGCCGCAGCGTGCACACTCCGAGAGCCCTATGCACATGTATGGC
AACTCATACCAACCCATCCAACACACCAGCCCTATCAGTGTGACTTCATACCCTACCCAG
ACTCCCACTCCGGGATCCATCGGGTCTCCTGCTCCACTACAGCAGCTCAATGAGGCTGTG
GAGTACGCTCCATTTGATTCGTTGCCGCTCAGTGCCATGTCCTCGGCCTACGTGTCGCCT
GCCCTGTCTCATTCGATTCTGGCTGGCGGACATGATATGGAGTACTCGTCCAATGAAGAG
GTCAACTTTACCAAGGACTCTATTGACCCGGAGTTGTTCCGACAGTAGGGGGGAAAGCAT
CAGAAAAAGAACGTTAGCATACATAGATCAATAGCATATCATTTATAATGGG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F05104g_CDS-001

Protein length: 656 aa.
Product: Conserved hypothetical protein

>YALI0F05104g_CDS-001 MFHEAELSDTPDGITHYDLPSRPTSAASSASSPVSSEWIEVKDAHGNPKRVPERKGLFFP
TRGETYGDAWNGNVPKEKTTVKRTLAHVCPEEGCDKAYSRPSLLKQHLRSHYNERCFVCT
YEGCGKGFFRRSHLKAHTNSHTVAKRYHCSFCAKGFNTRQHLLRHEVTHKSIKHCPHQDC
SKQCRTEVQLLEHCVADHATWKHQCTYPECGRAIGSERQMQYHWERDHNQTPQYKCPHDE
CEEVASQWIKLQKHVSKAHNRWLCHHCEGIFDDVQSMYEHEKSVHGLSVLYRGGHRTPGY
VRQLWTCPEESCGHQSFDKDLYAKHYVSHNKAPVRDMFESVAEYDITPEIIPYFEKPEKL
TRKGRSERTSLEGKSGEEEYQLPSERPAKRQRREVSKPTNTAASIVDKITGAGYSDSRTI
PCVVETCMHRFNRKYDLDRHVAANHATNCAVCPFGSHILTEVRDHMSDEHRTEWPAECYQ
ASPDAHIKIHLAYLRGETPEVEPVNTTSQNMYKNLHYPTPGLRRNAPRGQSNSSYNSPLH
SPIIQVPQRAHSESPMHMYGNSYQPIQHTSPISVTSYPTQTPTPGSIGSPAPLQQLNEAV
EYAPFDSLPLSAMSSAYVSPALSHSILAGGHDMEYSSNEEVNFTKDSIDPELFRQ*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG