YALI0F05082g

Overview

Description similar to uniprot|P20435 Saccharomyces cerevisiae YPR187w RPO26 DNA-directed RNA polymerase I, II, III 18 KD subunit
Locus type CDS
Locus tag YALI0F05082g

Location

Species Yarrowia lipolytica Positions 767009..767624
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 616 (nuc.)
Previous locus YALI0F05060g Next locus YALI0F05104g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F05082g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F05082gYALI0F05082g_mRNA-001YALI0F05082g_CDS-001

Nucleotide sequence

 

>YALI0F05082g
ATGTCTGATTACGGTGGAGACGAGGAAGCGTGAGTAGGGGTAAGGAGCGCCAGGAGGGAT
CACGTGCGTTTTATGGGGACGAACACGTGACTCGCGTCGTCCGATTACGTCCACAACATG
GCCCAGCACCCAGCGCCCAGACTAACACAGATTCAACGACAACTTTGAAAACGCCTACGA
GGAGGAGTTTGAGGAGCACGTTTCGGATGTGGAGGAGAACGGCGAGGAGGTGAAGACGGA
CGTGGCCGAGGACGGACGTCAGATCGTCAACGGAGAGGGCGTGGAGAACTTTGAAAAGGC
TGTGCGACGAAAGACGGTCCGAGAACTGGCCATCCCTCGAGAAGAGCGAACTACCACCCC
ATACATGACCAAGTACGAGCGGGCCCGAGTGCTGGGTACACGAGCGCTGCAAATCTCCAT
GAACGCGCCCATTCTCGTGGACATTGAGAACGCCACGGACCCTCTGCAGATCGCCATGAA
GGAGCTGCAGCAGAAGAAGATTCCTCTGGTGATTCGAAGGTACCTGCCCGACGGCTCCTT
CGAAGACTGGGGATGCGACGAGTTGATTGTCGATCAGTAAGTAATTGTAAGATAGCATAG
ATGGTTTGGAAAATGG

Legend

Locus sequence
Up/downstream sequence

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Translation(s)

YALI0F05082g_CDS-001

Protein length: 153 aa.
Product: RNA polymerase subunit ABC23, putative

>YALI0F05082g_CDS-001 MSDYGGDEEAFNDNFENAYEEEFEEHVSDVEENGEEVKTDVAEDGRQIVNGEGVENFEKA
VRRKTVRELAIPREERTTTPYMTKYERARVLGTRALQISMNAPILVDIENATDPLQIAMK
ELQQKKIPLVIRRYLPDGSFEDWGCDELIVDQ*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG