YALI0F05016g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0F05016g

Location

Species Yarrowia lipolytica Positions 760378..761458
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1081 (nuc.)
Previous locus YALI0F04994r Next locus YALI0F05038g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F05016g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F05016gYALI0F05016g_mRNA-001YALI0F05016g_CDS-001

Nucleotide sequence

 

>YALI0F05016g
ATGCGATTCTCCACCACTCTGCTAACTCTTATCTCTCTTGTCAACGCTCTGCCCGTTGCC
AACGACGAGCGAGACGTGGTTCTCACCCAGGAACAGACCGTCACTACCACCTGGTGTCCC
GAGACTGCCGAGGGCGAGACCGCCTCTCCGGTTGAGAAGGTCGTCACGGCCACCGTGGTC
ACCACCATCCAGTCTACCGATGTGGTCACTGCTCCCTGCTCCAAGTGCGAGGAGGAGGAG
AAGGCCAAGGAGACCAGCACTCCCGCTGCCGTCCCTGCTCCTGCCCCCGCCCCTACTTCT
GCTGCCCCCGAGAAGCCTGCTGGAGAGCCTATTCCTTCTCCTGCTCCTGCTCCTGCCCCT
GTCACATCGGCCCCCGCTCCCGCTCCCGCCCCCGCCGAGCCCTCCACAGTCTGGAACGTG
GTCACCCAGTACACCACCATCTGTCCCGAGAACTACGTGCCTCCTCCTTGTGACGAGCAG
GCCGCTGCCCTGTCTTCTGTGGTTTCTGCTGCTTCTGCCGCCGACGCTGCTGCTAAGAAC
GGCACCGCTGGAGCTCCCTCCGTCACCTCTCCTGACGCTGCTGTCGCCGCTTCCGTCCCC
GCATCTATCTCCATCCCCGACTCCCTCACAGCCGCCTTGGCCTCCGCAATCAGCGCCGCC
GCCTCCTACTCGGTCGATACCGACGATGTGACCTACCTTGACGTGACCGTGACCCCCACC
TCCACCGTCAACAAGACCGTGACCCCCACCGTCACCGTTGGCGGTTCTTCCACACCCTCT
TCCACTGCTGCCTCTTCCACCTCGGCTCCCTTCGAGACCGGACCTGGCAAGACCGAGGCT
ACCCCCGCCGTCTCCACCGAAGCTGCTTCTCAAAAGATTGTCGGAAACGCCCCTCCCACC
CCCGGACCCACCGTTTCCACCGCCTCCGACTTCTCTGCCTCCATCGCGTCCGCCGCCTCT
GCCGCCGTGGACTCGGCCCTCAAGGAGCTGGCTTTCTAATTGAAGCAAAGAGAAGGAAAA
AGGATAGGATACTAACTTATTGTGCATGCACGTTATAGATAATGAAGACATAGATAGCCG
A

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F05016g_CDS-001

Protein length: 333 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0F05016g_CDS-001 MRFSTTLLTLISLVNALPVANDERDVVLTQEQTVTTTWCPETAEGETASPVEKVVTATVV
TTIQSTDVVTAPCSKCEEEEKAKETSTPAAVPAPAPAPTSAAPEKPAGEPIPSPAPAPAP
VTSAPAPAPAPAEPSTVWNVVTQYTTICPENYVPPPCDEQAAALSSVVSAASAADAAAKN
GTAGAPSVTSPDAAVAASVPASISIPDSLTAALASAISAAASYSVDTDDVTYLDVTVTPT
STVNKTVTPTVTVGGSSTPSSTAASSTSAPFETGPGKTEATPAVSTEAASQKIVGNAPPT
PGPTVSTASDFSASIASAASAAVDSALKELAF*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG