YALI0F04356g

Overview

Description some similarities with uniprot|P43610 Saccharomyces cerevisiae YFR038w Putative ATPase containing the DEAD/H helicase- related sequence motif
Locus type CDS
Locus tag YALI0F04356g

Location

Species Yarrowia lipolytica Positions 669997..675093
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 5097 (nuc.)
Previous locus YALI0F04334g Next locus YALI0F04378g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F04356g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F04356gYALI0F04356g_mRNA-001YALI0F04356g_CDS-001

Nucleotide sequence

 

>YALI0F04356g
AGTGAGTAGGGGGATAAGAGATTGAGGAGGTTGATGATGACACAGTGACAGTGATGACAG
TGGCGACAGCAGTACCGACAGCAGTACCGACAGCGGCGACGGACGACGACTCTCTGATCG
ACATTCCTCCAAAGGGGGCGATCGTCGGACGCGGTTTCAAACAGGGTCTTGAAACTGACT
GTTTGAACGGCCCTGGCCGCAGCAGAACAGTTCAGTAACTGGTTCGAAACTCGAGCTGCT
TCTGGACAACTTCAGAGGACCATTGTACTGGTGTGTGCTGCTTTTGTACTGTTGTCGTAC
GGTCGATGGAATGACTTTTTGAGACTGGGCTGAAACTATTGCAGACGACCTTGCCGCTTA
GCGAGACCGATTATAGTCTCCGCAATGAGCATAGCCAAGGCCTTTCCGGCTCTACTGTCA
AAAACAATTTCTTCCTTGAGGATCAAGGCCAAGTTCATTCCTGAAAACTACTCAGTAGCA
ACTGTGCCCAGACAGTGGTGGAATTCTGGTGCCGATCTGAGTATTGGACTATGACTGACT
GGTGTCTGACTAGTTTAACTACTGCCGACGGACTTTGCAGCGACTAGATTGGTCTAGGTT
TGGTCAGGAGATCATCTGCTCCTCGACTCATCCCCATAATGAGATGACTAGACATACTGC
CCATAACCGACGTCTGGGTGGCTCGTGGAGTTCTTCAGCGACACAAGTGACTAGAGAACC
AGTTGATCGTAGTCACAGTCCACAGCTGTCTTACCAAGTCCCTGACGAGTCCCTGACAGA
GTTTACAGGCTGTTGCTTGTCCACCTGTTCCACCTTGATGGGTCATGAGGACCTTGACCT
TTATATCCGACCGATTCAGGACAGCAACTTCATGTACGGCATTCACATGTTGCTACGTTC
GACCTTCGGCCTCACTTCAGTACAGCACTAACCCAGTGGACATTTCCTCGCTCTCCGAGT
CCGACCGGTTCAACCGAATCTCGCATCTCCTGGAACAGTCTAAAGTCTACTCTTCGGTCC
TCCAAGACCGGCTGCAGAAAGAGCGCGAAGCCCGGGAGCTCGCCCGACAAGAGGAGGAAA
AGGCACAAGAAGCGTCACGAGACCGCAAAGATCGCCGCGAGGCGCGTGAGCGCGAGAAGC
AAAAGAATCTCGAAAAGCTCGAGGAGAAAAAGAATGCCACCAGGGGCAAGACGCGAGCCA
GCCGGCGCAAGGCGGTTCTGTCCAAAACTGAGGTTCAGGAAATGGACAAGTCCAAGAAAT
CCAAAAACTTCAAGAAAATCGGCCAGCCGCGAATCATCACCGGCGCGTCCATGTACGACT
ACCAGATCCATGGAATCGAGTGGATGGCGTCGTTGTACGAGAACGGGCTCAATGGCATTC
TGGCCGACGAAATGGGATTGGGCAAGACCCTTCAGACCATTGCATTCCTTTCTTTCTTGA
TAGAGAAGCAGGTTGGCGGGCCCTATCTGGTCGTGGTTCCTCTGAGCACGCTCAACAACT
GGGAAAATGAGTTTCGTAAGTTTGCACCGAGTATTCCCGTTGTCAAGTTTTATGGCGACA
AAAAGGAGCGGGCGGCACTTTGGAAGGGTGTGCGAGTGGACTATGAGATGAGGGGTCTGA
AAAAAAGGGGTGGGAAAGACGGCGAGTTTGTGGAGACCTTCCCGGTAGTCATCACCACTT
ACGAGACGGTTGTGATGGAGACCCGACGTCTGCAGATGATGACGTGGAAGTATCTCATTG
TGGACGAGGGCCATCGCATCAAGAACGTCAACAGTTTGCTTCTGAAGAAACTGAAGCTTC
TGGATACGTCGAATCGTCTGCTTTTGACCGGCACTCCTCTGCAGAACAATTTGACGGAGC
TTTGGTCTCTTCTCAACTTTCTGCTTCCCGACGTGTTTTCCGACCTCAGTATGTTCCAAT
CGTGGTTTGACGAGAAAGAAAACGGGTCTGGCGACGGGTTTGGCGGCGAGAATCGATCGG
CGGAGTTGGTGGAGACTCTTCATTCGATTCTGAAGCCGTTTTTGCTGCGACGGCTCAAGT
CGGAAGTCTATTCGAATCTGCCCGACAAACGCGAGTACTTGATTTACATCCAGATGGCTC
CTCTTCAGGAGGCTCTGGAGCACCGCCTGCGACGTCATGCACGGACAATCAACACCAAGG
CCCAGAAAAAAGACCGGGTCACTCCCGAGATCGTTCCCGAGCCTCTTGGCAAGCGGGTCC
GAAAGCAAATCGTGCGGGAAGACGTGGTTGACACTTTTGACGCTGATTTGGGGTCCGACG
ATGATGGATACGACTCGAACGAGAGTGTCGATCGAGACCTGAAGCGCCAGAAGAAGGAGG
ACTATGAAGAAGAAGAGGATTATGAGGACGGAAGTGACGGAGAAGAGGAGGAGGAAGAGG
AGGACGATGAAGAGGGGGGTTCTGAGGTCGAAGATGAGGGCATCAGAAAAAAGAAGAAGA
AGCACGTGAATTCAACTACCTCGTCTTCGTTGCTTCCTCCGGCCGACAAAGCGGCGCCCC
TAACCCAACTCCAAAAAGACATTATCGAGGGGCGGGTCAAATGGGTTGATAACAAGTGGG
TCCCCAAGACGGAGGAGGAACTGGCCAAGATGGAGGCCGATAGAGCGCTGGCCGAGAATT
TGATGAACGAGCACACCATGAGCGAAACGGCCCAAATGGCTGATCACGTGCCCAAAGACA
TCCTGGACGTGATTAACGATACGAAAAACGCCTCTACTACCATCCCCTCCCTGCAACCCA
TGCACCCGGACGCGCCCAGGCACGCCATCAAGTCTGATCCTCACCAAATGCCGCCGAAAA
ACTACTACTCGGCTCCAGATGGCAACTGGTACCCGCTGTACCTTCATCCGTTGTTCCCAA
AAAGGAAACAGACGGTGACAGGGATGACCAATCACGTGATTGGCAGTGACGGGTTTGGGA
AACCGCTCAAGGAGTCACATCAAAAGTCTCGTGAGCAAAAGTCTCGTGAGCAAAAGTCTC
GTGAGCAAAAGTCTCGTGAGCAAAAGTCTCGTGAGCAGTCGCCGTCGCAGAAGTTAGGCT
CTTGCGTCAGCACTGCCGCCAAAGTCGAGTCCCGTGACCTCACCTCTTCCTTCTCGGTGA
AAAAGGAGTTGGATCCTGTTGATCAGTACATGCTTCGGTTACAACTGCTCAAAGAGAAGC
GCGAGAAAGAGGAGGCTGAGGCGGCAGCTGAGCGGGCGAAAATGGATCCTGTGGATGCCT
ATGTCGACAAACTGAGGCAATTGCAGCGTTTGTCGCCTGAGGACGAGGAGGAGACGGATG
TGGAGACGAAGATGGAAGAGGAATTGAGACGGTTGAGAGAAGAGACTCTCAATTCACTAG
ATTCGGTGGAAGCAGAGACAGAGACCGAGTCCCGTGAAATGAGGGAGTTGAGGGCGGAGT
TGTTGGGTTTGAAGAAGCAAGAGGATGTCAAAAGTGAGTCTGAGACTGTCAAGAAGGGGT
CTTTCGGGGAGGACAAGGACTCGATGAAGAAGGAGCAAGTATCTATTTCGTCTTTTGTGA
AGAGTGAATCGGAGGGTGTTACCTCCAAAAATGATTCTGAGTCTTCTGGTGTTTCTGAGC
CTTCCGCGGTCACTGTCACATCTGGAATGGCTTTTGAGCCGATTTACAGTGCTTCCCAGT
CTTCTGAAGTGACTCATAATGCCCCTGAAACGGTTCAGTCGCCTTCTATGGTCTCTGACA
CGACGCTGAACCCTTCTACGCTCTCTGACACGGCTCTGAACCCTTCTATCGTCTCTGACA
CGGCTCCAAAACCTTCCACGAGCCCTTCTGTGACGCCAACAGCCCCTAAAACGGTTGTGA
AGCCTTCTACGACCTCTCAACTCTCTGCTGTCCCTCTCACGACGATCTCAGACTCGGACT
CTGACGAGTTTGCCTCTGCCAACGAGGACTTGCAAGAATCCAACGGAAAGGTTCCACCAG
AAGATCTGGACGAAGAAGTTAGTGAGAAACTCAAGGAGGAGGTCAAGAGCGAGCAGAAGG
TGGTGGATTCGGTTGATGAGAAAGCCGCCGAGGTGGTGCAGGAGCTGTCGACTTCGGTCA
TGCCTTCACGCGACCTCACTCCCGAGGAGCTGGCTCCGGATATTACGGAGTTCTTGTCTA
CGATTGCGTTTGACAAAATCTCCACTTCACAGACCCTGGCTAATCTCCGAAAAGTGGCCA
ATTCGCCATACCTCGTCAAGTTCCCCTGGGGCGAGGAAGAACCTGTTGACGAGCGAATCA
TTTCTGATTCAGGCAAGATGAGGGTGTTCGATCAGCTGGCGATGGAGCTGGTGAGCAGAA
AGCACAAAATGCTAGTGTTTTCGCAGTTCTCCGGCACCCTGGATCTGCTCACCGAATGGT
GCGAGTTCCGTCACTTGCCTTACTGCATGTTGATCGGATCCATGGGTTTGGAGGAGCGTC
AGGAGATGATTGATGCGTTCAACGAGGAAAGTGGCCCGTCCATTTTCTTGATCACTACAC
GCGCAGGCGGCACCGGCATCAATTTGACCGCTGCGGACTCGGTGGTCATTTTTGACAGTG
ATTGGAACCCCCAACAAGACAAGCAGGCGATCGATCGGAGCCATCGAATTGGCCAGAAGA
AGCCTTGTGTCATTTACCGGCTCATCTCAACCAACACCATGGAAGAAATGCTGGTTAGAG
TGGCTAGTGATAAAAAGAGACTGGATGAGATGGTCATTCAGGCCGGAGATTACTCCGGCT
TCTCCAAGGACGCCAACAAAACCGTGGATATCGACAAGACGTTTCTGCGAGAGATTATGA
CCGGTAAGAGTGATTATGAAGCGCATGAGGGCATCGAGAAGATTGATGACGAGCTGATGG
AAACCCTGTTGGATCGAAGTGACGAGAGTTACAAGAGACACAGAGATAAGACGGTGGAGC
TACCTAAGAGTATCGAGGTGATTATTGGCTCGCGAGATGAGCATACGTGATGAGCACACA
TACGCTCACGTGCTGAGCGCAGCGAGTCAGGTGTTTTTACCCTTGGTACCCGTTTCCTGT
TCTGAAGCGGTTCGTGCTGCGTCCATGGATGTATTTTAAATGTATTATTAGGGTGTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F04356g_CDS-001

Protein length: 1345 aa.
Product: Conserved hypothetical protein

>YALI0F04356g_CDS-001 MDISSLSESDRFNRISHLLEQSKVYSSVLQDRLQKEREARELARQEEEKAQEASRDRKDR
REAREREKQKNLEKLEEKKNATRGKTRASRRKAVLSKTEVQEMDKSKKSKNFKKIGQPRI
ITGASMYDYQIHGIEWMASLYENGLNGILADEMGLGKTLQTIAFLSFLIEKQVGGPYLVV
VPLSTLNNWENEFRKFAPSIPVVKFYGDKKERAALWKGVRVDYEMRGLKKRGGKDGEFVE
TFPVVITTYETVVMETRRLQMMTWKYLIVDEGHRIKNVNSLLLKKLKLLDTSNRLLLTGT
PLQNNLTELWSLLNFLLPDVFSDLSMFQSWFDEKENGSGDGFGGENRSAELVETLHSILK
PFLLRRLKSEVYSNLPDKREYLIYIQMAPLQEALEHRLRRHARTINTKAQKKDRVTPEIV
PEPLGKRVRKQIVREDVVDTFDADLGSDDDGYDSNESVDRDLKRQKKEDYEEEEDYEDGS
DGEEEEEEEDDEEGGSEVEDEGIRKKKKKHVNSTTSSSLLPPADKAAPLTQLQKDIIEGR
VKWVDNKWVPKTEEELAKMEADRALAENLMNEHTMSETAQMADHVPKDILDVINDTKNAS
TTIPSLQPMHPDAPRHAIKSDPHQMPPKNYYSAPDGNWYPLYLHPLFPKRKQTVTGMTNH
VIGSDGFGKPLKESHQKSREQKSREQKSREQKSREQKSREQSPSQKLGSCVSTAAKVESR
DLTSSFSVKKELDPVDQYMLRLQLLKEKREKEEAEAAAERAKMDPVDAYVDKLRQLQRLS
PEDEEETDVETKMEEELRRLREETLNSLDSVEAETETESREMRELRAELLGLKKQEDVKS
ESETVKKGSFGEDKDSMKKEQVSISSFVKSESEGVTSKNDSESSGVSEPSAVTVTSGMAF
EPIYSASQSSEVTHNAPETVQSPSMVSDTTLNPSTLSDTALNPSIVSDTAPKPSTSPSVT
PTAPKTVVKPSTTSQLSAVPLTTISDSDSDEFASANEDLQESNGKVPPEDLDEEVSEKLK
EEVKSEQKVVDSVDEKAAEVVQELSTSVMPSRDLTPEELAPDITEFLSTIAFDKISTSQT
LANLRKVANSPYLVKFPWGEEEPVDERIISDSGKMRVFDQLAMELVSRKHKMLVFSQFSG
TLDLLTEWCEFRHLPYCMLIGSMGLEERQEMIDAFNEESGPSIFLITTRAGGTGINLTAA
DSVVIFDSDWNPQQDKQAIDRSHRIGQKKPCVIYRLISTNTMEEMLVRVASDKKRLDEMV
IQAGDYSGFSKDANKTVDIDKTFLREIMTGKSDYEAHEGIEKIDDELMETLLDRSDESYK
RHRDKTVELPKSIEVIIGSRDEHT*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG