YALI0F04334g

Overview

Description similar to uniprot|P43609 Saccharomyces cerevisiae YFR037c RSC8 subunit of the RSC complex
Locus type CDS
Locus tag YALI0F04334g

Location

Species Yarrowia lipolytica Positions 665100..667015
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1916 (nuc.)
Previous locus YALI0F04312g Next locus YALI0F04356g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F04334g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F04334gYALI0F04334g_mRNA-001YALI0F04334g_CDS-001

Nucleotide sequence

 

>YALI0F04334g
ATGAGCGACAAGAGCGTAGAAGCCGGAGCGGACGCGGCCATGACCGACGTGAACGGCGAT
GGGTCGATTGGCGCCCAGACCGCCAAGATTGAGGCCAACGACGCCGATCTGAAGCCCGAC
AGCAGTGAGGTTGGAGGCGCGCACAACGACACGGCTCAAACAGCGACCAAGTCCGACAAG
AAAGACGACACAAAGCCCAGCGACAAGGAGGAGTCCGTGGAGGGCGGCGGGGACGACGCG
GGAGATGCGATTTCGGCCGAAGAGGCGAAGCTCGAGGAAAAGGCTCGGGCGTATCTGGCG
GAACAAACACAACGGGTGGTGATTCCGTCGTTTGCCACGTGGTTCGACCGCAACGGCATC
CACGACATTGAACGCAAGTCGCTGCCGGAGTTTTTCTCGGGCGTGTCGCGCACAAAGTCG
CCGGCCATCTACACGCAGTACCGCAATTTCATGGTCGACACGTTCCGTCTGAACCCCGTC
GAATACCTGACCTTCACCGCCTGCCGACGCAACCTCGCCGGCGACGTCGGCACCCTGCTG
CGGGTCCACTCGTTTCTGGAACAGTGGGGCCTGATCAACTACCAGGTGGACCCCGACACC
CGGCCGTCTCTGATGGGCCCCCAGTTTACGGGCCACTTTAAGGTGATGGTCGATGGCCCC
CGGGGACTCCAGCCTTTTGAACCTCCGGCAAAGAGCCTGCTCTCCGAGGGCCAGGAGGAC
CCCGAAAAGGGAACCGACGGCGACTCCACCTACGTTGCGACCTCGACTGAGCTTGACGAC
TCCACTCCCCCCTCAATCAACATGGAGATTCGACGAAACATCTACTCGTCGGCCGCCGAC
GCCGCGTCGCTGCAGGACGAAAATACAAAGTCGCAGAACGTGCTCGCGTCCAAGGCGTAC
CACTGCCAGACCACCGGCGGTGACGTATCGGTGGTGCGGTACCACAACCTGCGGTCCAAG
CAGGCGGTGGCGCAACTCGCGTTCGAACAGGGCCTGTTCCCGGCCACCCAGCAGGCGTCT
GACTTTGTGCGCATCAAAAACTCGACGGCCCAGGGCCCCTGGACCGACGAGGAAACCCTC
TTGCTTCTGGAAGGCGTGGAGATGTTTGAGGACGACTGGGACAGCATAAGCGACCATGTC
GGCACCCGTCAGCGTGACGCCTGCGTCATCAAGTTCATCCAGATGCCCATTGAAGACGCA
TACCTGGTGAAGCGAGAAAAGGGCGTCAAGCGGGCCCATTCCGACTCCAACAAGTCCACG
GTGCTGGCATCCGCCATCAAAAAGGTTCTCAAGGAAGGAGACGGAGAGCTAATGAGCAAG
CGGGCGGAGGAGCTAGCTGGCCAGGCCGTCTCCGACGCCTCCACGCTCGTTTCGTCGCTG
GCCGAAACCCAGATAGCCAAAATCGAGCTGAAAATGTCCCGGTTCGACCAGCTGGAGGAA
ACGGTGCGGCTGGAGCGCCAAGAGATTGAAAAGATGCGGCAGCAGCTGTACCTGGACCGT
TTGTCGTTGAAGAAGCAGGCCGACAGTGTGTTGGCCAAGCTCAAGGAGGCGACCCAGCTT
GGGGGCGACGAGGCGGTGGCGGTGGCAGCAGAGGCGGCTCGAATCGCCGCTCGCAACCCC
AAGGTGAGCGTCGTTGAGGAGCGCGATGAGGGCGAGGTGCGAGAGAAGAAGCCGGTGTCA
TTGGGAGGACCTGAGTTGTTCAAGTTCTGGAGTGCCTAGACGGGCATTTCCTTAGGGGCT
TGTCCAGAAGGCTTGTCCGGAAGAGTCTTGACGAGAGTGATCTTGTCGGGACGGTCCTCG
TCGCATTTTCGTCTCGACACGACTTGGAATTGACAGCCTGCTCGACATACCCACAACCAC
CCTAACCCAAAGACGGAGATGTATGTATTTGTAATTGTATTGCTTAGTATGGATAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F04334g_CDS-001

Protein length: 573 aa.
Product: Component of the RSC chromatin remodeling complex, putative

>YALI0F04334g_CDS-001 MSDKSVEAGADAAMTDVNGDGSIGAQTAKIEANDADLKPDSSEVGGAHNDTAQTATKSDK
KDDTKPSDKEESVEGGGDDAGDAISAEEAKLEEKARAYLAEQTQRVVIPSFATWFDRNGI
HDIERKSLPEFFSGVSRTKSPAIYTQYRNFMVDTFRLNPVEYLTFTACRRNLAGDVGTLL
RVHSFLEQWGLINYQVDPDTRPSLMGPQFTGHFKVMVDGPRGLQPFEPPAKSLLSEGQED
PEKGTDGDSTYVATSTELDDSTPPSINMEIRRNIYSSAADAASLQDENTKSQNVLASKAY
HCQTTGGDVSVVRYHNLRSKQAVAQLAFEQGLFPATQQASDFVRIKNSTAQGPWTDEETL
LLLEGVEMFEDDWDSISDHVGTRQRDACVIKFIQMPIEDAYLVKREKGVKRAHSDSNKST
VLASAIKKVLKEGDGELMSKRAEELAGQAVSDASTLVSSLAETQIAKIELKMSRFDQLEE
TVRLERQEIEKMRQQLYLDRLSLKKQADSVLAKLKEATQLGGDEAVAVAAEAARIAARNP
KVSVVEERDEGEVREKKPVSLGGPELFKFWSA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG