YALI0F03861g

Overview

Description weakly similar to uniprot|B6Q857 Talaromyces marneffei conserved hypothetical protein
Locus type CDS
Locus tag YALI0F03861g

Location

Species Yarrowia lipolytica Positions 569483..571531
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 2049 (nuc.)
Previous locus YALI0F03839g Next locus YALI0F03883g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F03861g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F03861gYALI0F03861g_mRNA-001YALI0F03861g_CDS-001

Nucleotide sequence

 

>YALI0F03861g
ATGGACTTGGTACCAGGCAAACTGCGCTACCTGTGCATCTACAACCCGACTCTGGGGACC
ACGCAAAAGGAGTTACACAAACAGATCCTTTACTACCACTCGGAAGATGGTCCCGTGTCT
GTGAACGAGCAGCTGCGGGAGATAGGTCTGGCGCAGGGCATGGTGGAGTTCAGCAAGGAG
CTGAGTGGCGGCGAGAGATTGACGCACGTGACCTCAAAAAAGACGAGGACCTTGGTGGTC
AATCTGGAGGGCGACATCTGGGCCGCTCTTTGTGTCCATCTGCCTGTGGAGGTCAGGAAT
GGGGTCGTTGGGGAGTACACCATGAAGGGGTTGAGTGGAGTTGATGTGATGATTGGAGAG
TTGAGACAGTGCTGGGGGAGATGGAGGTTATTTAACGAACATGATGAACGTGACGTGAGT
TACACGAGTCACGTGAGTGGCTTGAAGATTGATCTGAATACAGATCAAAGGGCTTCCAAT
AGCACAGGGTCTCTCGTTGCGACGAAACCCAAGAGCAGCTTATGCAACGAGGTAGTTCCT
GACGAGTCACGTGATGGTGAGGAGACTAGTGACAATGTCAACAGCCAGTCACATGATCAC
AGCGATGCTGACCAGGAAGGTACCACAGATCACGACAAACCTGAGCCAGGAGACACCTCG
ACAGTGGTCCAGACCAATGGGTCGCGTGAACAGTCGCGTTATGTGCCGGAAGGTGCTACC
AATGTTGGTGTTGGTGCAAGCGAAACAATTGAACCGGAGAGTTCCAGGTCTGATGGAAAG
GCACATGATAGTTCACGTGATGAGGAAAATGGCAAATCTGATACAGTTGTTGACAATGGC
AAAAAGTCACATGACCTGTCTGCATCTCAAATAACCCAGGGATCGACCACATCAGACTCG
CTACGTTCGTCGGATGCTCTCTCCTCCTTTTTCAATGCCTTTTCCTCCTGCTGGAACCCC
AATCTCCACTCCCGAGGCATCCTGGACTCCATTCCATACACGGAAATCGACCGGATCAAA
CTTTCCGAAGACACTACTCAAGTGATTGAGGCTGTTCTTTCCAAAGACCCCAACCTGGTT
CACTGCAGCATCGCCCGAAGCGAGTCACGTGACCTTGGTAATCGCACGCAGGGCCACTCC
AAAATTGTCTATTCCTCGTCACCCTGTTTCCCGCTATCTTTTTGGCTTCTGGAATGTTGC
GACATTGGCGACGAAATGGCGTTTGCAGAGGAATCCGGGTTTGTGAGTCATGTGAGCATC
CGCAAGTCACGTGCCCAACTCGCAGACTACGCCTCCGAGAACCCCAGTCCTAGTCCTACT
TATATTAGTAAGCTAGGCACCTTGACTCAAAGCACAGTCTCCACTTTGACATCGTGGAAC
CCCTGGAAGCAGCATTACCCCAACTCGGAAGAAGCAATTGCTCCAGAAGACGATGTAGAA
GATGGCAAGTTTGTGGTCAAGGGTAGAGTTGCGTGCACCAAGGAGTATGGTGTTTCCTAC
CTAGTCGTCTACCAGAGGGCCCCCTTAACTTTTGCCTTACTCTACAAAGACACTACAGAC
ATTGTCTATCCCAATCTCAATCTCAAGCTCGCCTCTTTGGTGGAGCCTGTGGTTCGGGAC
ATTGAGCGTGGTTCTGGAAACCCGCATTACCCTAAACTGCTCGCCTCTCCGGACCCCTTT
TACTACATTGTGGTCGACTCTAAACAAAAGACGCTGACCACGAATCTTCGTCACGTGCCG
TTCGACACGGAGGTGGTCAATTTTGTGAATCCCAACCCAGACCCTCACAATTCGGAGGTT
GCGCATGTACATGCCCAATTTGGACGGTTGATGAGTCAGCAGGAGGCATTTCTGGGCCAC
GAGAAGCTGGCCAGGTCTAATCAGAACTGGTGGTTCTATTGGACCCGGTTGCCGGACCAA
CGGCAGATATATATGGCTAGAAAGTGGCTGAAAAGCAAGCCTTCTGCTGATGGTCATAGT
GTGGTAAATGCGATGGGAAAGAGTGCAAAATTGTGGTTGGATGGGTATGTCAAAACTGGA
TTGACGTAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F03861g_CDS-001

Protein length: 683 aa.
Product: Conserved hypothetical protein

>YALI0F03861g_CDS-001 MDLVPGKLRYLCIYNPTLGTTQKELHKQILYYHSEDGPVSVNEQLREIGLAQGMVEFSKE
LSGGERLTHVTSKKTRTLVVNLEGDIWAALCVHLPVEVRNGVVGEYTMKGLSGVDVMIGE
LRQCWGRWRLFNEHDERDVSYTSHVSGLKIDLNTDQRASNSTGSLVATKPKSSLCNEVVP
DESRDGEETSDNVNSQSHDHSDADQEGTTDHDKPEPGDTSTVVQTNGSREQSRYVPEGAT
NVGVGASETIEPESSRSDGKAHDSSRDEENGKSDTVVDNGKKSHDLSASQITQGSTTSDS
LRSSDALSSFFNAFSSCWNPNLHSRGILDSIPYTEIDRIKLSEDTTQVIEAVLSKDPNLV
HCSIARSESRDLGNRTQGHSKIVYSSSPCFPLSFWLLECCDIGDEMAFAEESGFVSHVSI
RKSRAQLADYASENPSPSPTYISKLGTLTQSTVSTLTSWNPWKQHYPNSEEAIAPEDDVE
DGKFVVKGRVACTKEYGVSYLVVYQRAPLTFALLYKDTTDIVYPNLNLKLASLVEPVVRD
IERGSGNPHYPKLLASPDPFYYIVVDSKQKTLTTNLRHVPFDTEVVNFVNPNPDPHNSEV
AHVHAQFGRLMSQQEAFLGHEKLARSNQNWWFYWTRLPDQRQIYMARKWLKSKPSADGHS
VVNAMGKSAKLWLDGYVKTGLT*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG