YALI0F02607g

Overview

Description similar to uniprot|Q9C1L3 Neurospora crassa G6G8.5 Putative 3-hydroxyisobutyrate dehydrogenase
Locus type CDS
Locus tag YALI0F02607g

Location

Species Yarrowia lipolytica Positions 387215..388319
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 1105 (nuc.)
Previous locus YALI0F02585g Next locus YALI0F02629g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F02607g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F02607gYALI0F02607g_mRNA-001YALI0F02607g_CDS-001

Nucleotide sequence

 

>YALI0F02607g
ATGCTCTCATCCACTCTCAGAAGCTCCGTCAAGGCCCTGCGACCGCTGCGGGCCTCCCGG
GACCTGTCCTACGGCTTCATTGGTCTGGGTCGAATGGGTCTGCCCATGGCCCTCAATTTG
CAGAAGAAGCTGCCCGGTGTCGACGCTGACTCCAAGGTCAACGTGTTCGACATGAACAAG
GCTGCTCTAGAACAGATTGCCAAGGACAAGGATCCCAAGGGCGCCCAGCTGGAGGTGCTG
GGCTCTGCCGTGGACGTGGCCAGCAAGTCCGATGTCATCTTCACAATGCTCCCTGAGCCC
GTCCATGTCCGAGGAGTCTACACCGACCTGGTCAACAACCTCGGAGACAAGACCTCCAAG
ATCTTTGTCGACTGCTCCACCATTGACACTCAGACGTCAATTGAGTGCGGTAAGCTTGTG
ACCGACAAGGACGCCTCTGCTGCCTTTGTGGACGCCCCCGTCTCCGGAGGTGTCGTGGGA
GCCGAGAAGGGCACCCTCACCTTCATGGTCGGGTGCAACAAGGACAAGCAGCAGGTGTAC
AAGCAGGTGGAGGAGCTGCTCAAGCTCATGGGTGGCCGAATCGTCAACTGCGGCACCCAG
GGCCAGGGTCTGGCTGCCAAGCTTGCCAACAACTACCTGTTGGCTGTGACTAACGTTGCC
ACTGCTGAGGCTTTCCATCTTGCTGAGAAGCTTGGATGCGACCTCAAGCTCTTCTCAGAC
ATTGTCAACTCCTCTTCCGGTCGATCTTGGTCCTCCGAGGTGAACAACCCCGTCCCAGGT
GTCAACCCCGCTACTCCTTCTTCTCGAGACTACGTTGGAGGCTTTGGTATCAACCTGATG
CGAAAGGACCTGGGTCTGGCCATCGATGTGGCCAAGCAGTCTGGATCCTCCATGCTTGTG
GCTGACAAGACTTACGAGGTCTATCAAAACATTGAGAAGGGAGACAACTACCAGGGCAAG
GACATGTCTGTTATCTACAAGTTCCTCCAGGATCAGGATCAATAAAACAAATACAAGTTT
TAAGCTGACCCAATGAACTGTGAAACGTATTGCATAAACATTTCATGGATCATGACTAAA
TAATGAATGATGATGTATGACTTAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F02607g_CDS-001

Protein length: 335 aa.
Product: 3-hydroxyisobutyrate dehydrogenase, putative

>YALI0F02607g_CDS-001 MLSSTLRSSVKALRPLRASRDLSYGFIGLGRMGLPMALNLQKKLPGVDADSKVNVFDMNK
AALEQIAKDKDPKGAQLEVLGSAVDVASKSDVIFTMLPEPVHVRGVYTDLVNNLGDKTSK
IFVDCSTIDTQTSIECGKLVTDKDASAAFVDAPVSGGVVGAEKGTLTFMVGCNKDKQQVY
KQVEELLKLMGGRIVNCGTQGQGLAAKLANNYLLAVTNVATAEAFHLAEKLGCDLKLFSD
IVNSSSGRSWSSEVNNPVPGVNPATPSSRDYVGGFGINLMRKDLGLAIDVAKQSGSSMLV
ADKTYEVYQNIEKGDNYQGKDMSVIYKFLQDQDQ*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG