YALI0F02585g

Overview

Description similar to uniprot|P40327 Saccharomyces cerevisiae YDL007w YTA5 26S proteasome regulatory subunit
Locus type CDS
Locus tag YALI0F02585g

Location

Species Yarrowia lipolytica Positions 385510..387043
Strain CLIB 122 Strand Sense
Chromosome YALI0F Total length 1534 (nuc.)
Previous locus YALI0F02563g Next locus YALI0F02607g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F02585g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F02585gYALI0F02585g_mRNA-001YALI0F02585g_CDS-001

Nucleotide sequence

 

>YALI0F02585g
ATGGTGAGTATAGCGCGGTTTCTGCGCTTGGAGGGCAATGGATGGTGGCCAAACGGTTGC
CACGACACGCCGATTGTCACAAAATCCGGTTTTGATCCAATTCTCGCAAGGTGGCGAATG
ACCACTACAATCAGTACTAACCCCAGGGTAACCGACCATCACTCCCCGGAGACAAGAAGA
AGGACGACAAGAAGAACGAGAAGCCCAAGTATGAGCCTCCCGTGAACACACGATCGCATC
GAAAGAAGAAGAAGGGCCCCGAAAACGCCAACAAACTGCCCGGCGTGTACCCCACGACAC
GATGCAAGCTCAAGCTGCTCAAGATGGAGCGAATCAAGGATCATCTGCTGCTGGAGGAAG
AGTTTGTGCAGAATCAGGAGCGTCTCAACCCGCTGGACGACAAGGTTGCCGAGGAGCGAT
CAAAGGTTGACACTCTGAGAGGTTCTCCCATGGGCGTGGGCACTCTGGAGGAGATCATCG
ACGACGATCATGCCATTGTCTCGTCCACTTCTGGCCCCGAGTACTACGTTTCGATCATGT
CTTTTGTTGATAAGGATCTTCTAGAACCCGGCTGTTCTGTTTTGCTGCACCACAAGACTG
TGTCTGTCGTTGGAGTGCTGCAAGACGATGCCGACCCCATGGTCTCGGTAATGAAGTTGG
ACAAGGCCCCCACAGAGTCGTATGCCGATATTGGAGGTCTGGAGTCGCAGATTCAGGAAA
TTAAGGAGTCCGTGGAGCTGCCACTCACACATCCAGAGCTCTATGAAGAGATGGGTATCA
AACCCCCCAAGGGAGTCATTCTTTACGGCGCTCCCGGAACCGGAAAGACACTGCTGGCCA
AGGCCGTCGCCAACCAGACTTCTGCTACATTTTTGCGAATCGTTGGATCCGAGCTGATCC
AAAAGTACTTGGGAGACGGTCCCCGACTGTGTCGACAGATTTTCCAGATTGCCGCAGAAC
ACGCACCGTCCATTGTTTTCATCGATGAGATTGACGCTATTGGAACCAAACGATACGAGT
CGACGTCTGGCGGAGAGCGAGAGGTGCAGCGGACCATGCTGGAGCTTCTGAACCAGCTGG
ATGGATTCGACGACCGAGGAGACGTCAAGGTAATTATGGCTACAAACAAGATTGAGTCGC
TGGACCCTGCACTGATTCGACCTGGTCGAATCGACCGAAAGATTCTGTTTGAGAATCCCG
ACTCCACCACCAAGCGAAAGATTATGGGCATCCACACCTCCAAGATGAACCTCAACGACG
ATGTTGATCTCGAGGAGTTTGTGTCTTCCAAGGATGAACTTTCTGGAGCCGACATCAAGG
CCATGTGCACCGAGGCAGGTCTGCTTGCTCTGCGAGAGAGACGAATGCGGGTCACTGCTG
AGGATTTCCGAACCGCTAAAGAGCGGGTCATGAAGAACAAGGTGGAGGAGAACCTTGAGG
GTCTCTACCTGTAAGCATAGAAGCATTAACGTATGACTATAATAAATACATCAATGAGGT
GGAGGTTGACGGGGACTTCTTCGTATACATACTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F02585g_CDS-001

Protein length: 437 aa.
Product: ATPase of the 19S regulatory particle of the 26S proteasome, putative

>YALI0F02585g_CDS-001 MGNRPSLPGDKKKDDKKNEKPKYEPPVNTRSHRKKKKGPENANKLPGVYPTTRCKLKLLK
MERIKDHLLLEEEFVQNQERLNPLDDKVAEERSKVDTLRGSPMGVGTLEEIIDDDHAIVS
STSGPEYYVSIMSFVDKDLLEPGCSVLLHHKTVSVVGVLQDDADPMVSVMKLDKAPTESY
ADIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTS
ATFLRIVGSELIQKYLGDGPRLCRQIFQIAAEHAPSIVFIDEIDAIGTKRYESTSGGERE
VQRTMLELLNQLDGFDDRGDVKVIMATNKIESLDPALIRPGRIDRKILFENPDSTTKRKI
MGIHTSKMNLNDDVDLEEFVSSKDELSGADIKAMCTEAGLLALRERRMRVTAEDFRTAKE
RVMKNKVEENLEGLYL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG