YALI0F01859g

Overview

Description weakly similar to uniprot|D5G9U0 Tuber melanosporum hypothetical protein
Locus type CDS
Locus tag YALI0F01859g

Location

Species Yarrowia lipolytica Positions 291481..293958
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 2478 (nuc.)
Previous locus YALI0F01837g Next locus YALI0F01881g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F01859g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F01859gYALI0F01859g_mRNA-001YALI0F01859g_CDS-001

Nucleotide sequence

 

>YALI0F01859g
ATGCTGTTTCCACATCTTGCGACGATACTAACGGTGGCGTCAGGTGTTCTGGCGTCCAAG
CTGAAGGAGTGGCCCAAGGTCGAGAGTCCCATCAAAGGTCCTCTGAACTCGCTGTTCACC
TCTCAATGCGCCTCCGACATCAACAACCAACTACAAGCCATGTGGGACACCCTGAGCTCG
AAACACAAAAATTATCTCACAGACGACAACAAGGATCCCGTTTCGGTGCGATTGTCACCC
AAGGAATACCAGCAGCTGTTGGAACAGCTTCGAGAGTGCTCCTCCGACGATCCACAGGCG
CTCTTGTTGCTGGCTGAACTGCTGACGTTTGGACACTACTCCGTTCGCCCACAATACGCA
GCCGGCTTTGCGGCCTACAAGCAGTATGCCGAGCTCACGGGTGACCCCGCAGCGCAGTTC
TTTGTGGGTTTGCTATACAGCACTGGTTTGTTTGGACAATGGCCCAGAGATCAGGCACGG
GCTACATTATACTACTCGTTCGCAGCCAAGGGAGGCGATGTCCGGGCGCAGATGGCAATG
AGCAACCGAATCAACAACGGTATTGGAATGCCTCAGGACTGTGATGCTGCTCTCAAGTAC
CTGCGACTGGCTGCTAACCAGACACTCAACTACTTTCTGGACGGACCTCCTGGAGGCAAG
CATCTGGGCCCCTCATCGTGGCATCTGGCAGACTCCAACTACGGGCTCTACGGAAATCTG
GGCAAGGAAACGTCCATGTACGACGAGTATGCTGAGGACTCGTCGGAGGAGATTCTAGAA
TACGCTGAGCACATGCTGGAGGGCAAGGTGGCCGAGTACAAGTGGTCACTCAGTGAGTTC
TTCTATCGGGGCTCCCAGAACGTCGAGCCGGACCTCACTAAGTCCGCTCGACTCGCCCAC
GAGTGTGCTGGGCTATTTTTCACAGATCTTGACGCCAAGGAGGTGGCCCCGGCTCGAGAA
TCACAATGGTATTCGGTGCGATGTGCCACGCGGCTCGGGCAGATGTACATGCGGGGCGAG
GGAGTGGAGCAAGACTACAAGCTCGCACACAAGTGGTTCCACAAGGCATGGCAGGCATCT
GGAGGTCAGATTGGAACAGCTGGAAATGGACTCGGATACATTTACAGGCACGGGTTGGGG
GTCAAGCAGAACACAGAGAAGGCCATCCGGTACTTCCACAAGGCCGCTGAGCTGCAAAGC
TTGCCTGCCCATTACAATCTGGGAGAAATCCAGCTAGAACGGGGAGATCACAAGGCAGCT
CTGCGGTACTTTTCCGAGGCTGCCACTGTAAATCTGCCAGCAATGTATGAGACTGGCGAG
TACTATTTCCGAGTTCGTGAGGACCCTGCTATTGCTGAGGCTGTTGCTACAGTGGGTACT
TACTCTGACGAACTGACTTGCTCAAAGACATACAAGCACTTCAAGCTGTTCAACGAGCGA
ATCTGCGGTAATAAGTTCCCTCGGCGCTGGGCACTTCAGCAATGGAACCTAGGCACCTTC
CATAATGCATTTGTTGGCTTTGTCATCGAGGCTGAACAAGGCTCTGAGAATGGTCAGTTC
AACGCTGCCTACGTGGTCGACGAGTGTCTCAACTATGACGACAACGGAGTTATTTCCGAG
AGTGACAAGCTCAGCGCTTTGGCCTACTGGACTCGGTCTTCCATCCAGTCCAATTTTGAG
TCGACTCTACGAATGGGTGACTACTACCTTTATGGTATTGGAACCAAGCCTGATGCTGAG
AAGGCTCATGAGTGCTACACCGGTGCTGCTGAGCGGGGCAACCTCGGTTTGGCTCGTTGG
AACCTGGGATGGATGCATGAGCACGGAATTGGTGTGTCTCAGGATTATCATCTGGCCAAG
CGGCACTACGACTCGGCCCTGGTGGCTAATCCTGACGCCTATCTGGCCGTCTATCTATCT
CTGGCAAAGCTGCGATTCAAGATCATTGCTAGTGCCATCGGCGGCTTCCTGGGCTATAAG
AAGAAGACTGACACGCAGGTGAGCATCATTGGAGGCCCCAGCAACAATGCCAAGTCCAAC
TTTGCGCGGTTCCGCAACATGGTCATTCGGTTCAACCGAATCGGCGTTCTTGATCTGGCT
CTCCTTGGTTCCTTCATTCTTGTGGTCTACCTGCTTTCCAATCGCCAGGCTGTCAACCCC
GAGATTGCCAATTTGCCTGATGTGGACGAGGCACCTCGAGATACTGCGGTAAACGCTCCA
CGAGAGGAGCCTGCCGAGCCCCAGCCTCTGCATCGACCCCTAGGTCCTCATCTTGGAGAC
CCTGAAGACGGAGCTTTCCCCAGTTAGAGACTGTCTGACACGCCTCTTCCTCTACACCTG
CGTGGTGTATGCATAAAGCCGATAACCCTTGAACCTAATCTGGATACGAGTGTTTACGTC
CACGGTATTTCAGTAATGGGTAGCGCACGCCGGCGCTTTATGAGTGTTTATATAGCAAAT
TGTCATGATTTGGAAACC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F01859g_CDS-001

Protein length: 769 aa.
Product: Conserved hypothetical protein

>YALI0F01859g_CDS-001 MLFPHLATILTVASGVLASKLKEWPKVESPIKGPLNSLFTSQCASDINNQLQAMWDTLSS
KHKNYLTDDNKDPVSVRLSPKEYQQLLEQLRECSSDDPQALLLLAELLTFGHYSVRPQYA
AGFAAYKQYAELTGDPAAQFFVGLLYSTGLFGQWPRDQARATLYYSFAAKGGDVRAQMAM
SNRINNGIGMPQDCDAALKYLRLAANQTLNYFLDGPPGGKHLGPSSWHLADSNYGLYGNL
GKETSMYDEYAEDSSEEILEYAEHMLEGKVAEYKWSLSEFFYRGSQNVEPDLTKSARLAH
ECAGLFFTDLDAKEVAPARESQWYSVRCATRLGQMYMRGEGVEQDYKLAHKWFHKAWQAS
GGQIGTAGNGLGYIYRHGLGVKQNTEKAIRYFHKAAELQSLPAHYNLGEIQLERGDHKAA
LRYFSEAATVNLPAMYETGEYYFRVREDPAIAEAVATVGTYSDELTCSKTYKHFKLFNER
ICGNKFPRRWALQQWNLGTFHNAFVGFVIEAEQGSENGQFNAAYVVDECLNYDDNGVISE
SDKLSALAYWTRSSIQSNFESTLRMGDYYLYGIGTKPDAEKAHECYTGAAERGNLGLARW
NLGWMHEHGIGVSQDYHLAKRHYDSALVANPDAYLAVYLSLAKLRFKIIASAIGGFLGYK
KKTDTQVSIIGGPSNNAKSNFARFRNMVIRFNRIGVLDLALLGSFILVVYLLSNRQAVNP
EIANLPDVDEAPRDTAVNAPREEPAEPQPLHRPLGPHLGDPEDGAFPS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG