YALI0F01837g

Overview

Description some similarities with uniprot| A3LZH5 Scheffersomyces stipitis Leucine rich repeat protein, contains F-box
Locus type CDS
Locus tag YALI0F01837g

Location

Species Yarrowia lipolytica Positions 287438..290377
Strain CLIB 122 Strand Antisense
Chromosome YALI0F Total length 2940 (nuc.)
Previous locus YALI0F01815g Next locus YALI0F01859g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0F01837g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0F01837gYALI0F01837g_mRNA-001YALI0F01837g_CDS-001

Nucleotide sequence

 

>YALI0F01837g
ATGGCGTATCGACGCAAAAAGTTCTTTGGAAAACGCACAGAAGCCGGCCACGTGGCCCGC
ACGCCGTCACAGCTGCAGGAGGTGTACTCGGACGACGACGACGGCGAGGGTGAAGATGTG
GAGATGTGGGACCAGCCCGAGGTCAAGGATACACACAACGCCGATTCCGGATCGCCAGCG
TCGCCAGCCGCCGCAATGCCTCCACGAATGAGCGACTCTCTGTACCAGGAGACCAAGGCC
GAGGCCGAGGCTTCTGCTGGCCCGCAGGGTGCTCCAGGTGACCTGTACTCGCTGATCCGC
ACGTTCCCGCTGTTCAAAATGGCCCCCAACGCCTTTGTTATTGCCGTGTCGGCCAAGCTG
CGCATCCAGCAGGTGTCGCCACAGGAGTACATTGTCACACAGGGCGACGAGGCCAAGGCC
ATGTACTGGATCCTCAAGGGCCAGGTCAATGTGACGAGCAGAGATGGAGAGAGTGTTTAT
GCCGAGCTGGAGGCTGGCTCGTTTTTCGGCGAGATTGGAATTCTGTTTGATCGACCGCGA
ACGGCAACGGTTTTAGCATCGACAAAGTGCGTGTTGGCGGTTCTCAAAGGCGACAGTCTC
AATGACATCCTGCCAAAATTTCCAGCAATGGAACGAGCTATCAGAGACGAGGCCCAGGAG
CGTCTGGCCATCATCGAAAAAACGAAAATCAACCAGCGTAAGTCCCTTTTGACTGGAATG
GTGTCGCCCACTACGTCAATCCGAAACCTCCTACACGAAATGCCGTTGTTCCGACACATT
CCAGAAACAATAGTGCATAAGCTGGCGCTGGCAGTAGAGCCTCGCACTTATGAGCCGTTC
CAGTACATCATTAAGCAGGACACAATTGGCCAGGAGATTTACTTTCTGACCAGCGGCATC
GTGGAGGTCATTGACGAGCGGGAAATTGGCACGGCGGCACACATCATTGCCCGGTTGACC
AAGGGGTCGTACTTTGGAGAAATGGCGTTCCTGAGCTCTAATCCCGTACGAACCGCGTCC
ATTCGATCAATCAGCATGGTGGAGTGTCTGGTTCTGACTACAGACACGCTGGAGTCGCTG
TGTTCTCAGTACCCCGATATTCAACAACATATCGAGCAAACAGCCTCGGCTCGAATAGAG
CAATATCACCGGGACCCAAAAACACATGACATTATTAACAATACTACAACAGATACACAA
TCAGCTGGAGCTGGACCAGCTTTACCTGTCGATATGACTAGACGCCGCTCAGTGGCTGAT
TTTGGCGGTAAGAAGAACTACAGCTTGTTCACCGTCAGTCGAGGAGGAGCTACCTTCTTT
AGTGAGCCCAAGGATTACCATATTTCTCTTCCAGGAGCAGAAAACACGACAGTGTCGCCT
ATGACAAGTAACCATTCTCATACTAGACGATACAGCACAGGCACGGTTTTCGAGCCTGTC
ATTTCCCGTGATGGTCGAGTCGTCTTTTCCAACTCGTGGGAATCTAACTCGGGCGTGTCT
GAAGAGGCACCCTTGTCTCTGGGCAATTATCAGATGGCTCAGCCTCGGAAATGTCTTTCC
GCAGGAAGCAGTGGTGCTACCTCTCCTTCCAAACGGCCTGCCTTTGACAATCGAGATGAC
GAACCACTTGGAAAAGATAAACGGGAAATGTCTCCTCGAGATTCTTCTCCCTCTTCACCT
GGTGCAGCTCCTCTGGCTAGATCTTCGTCTACTGGAGCTAGTGTTAAGACGATTTCCCCC
CAGCGATACTCGTCGTTCCTCTTGCATCCTCGGCTCAAGAAGCAAAAGACATTTCAGCGA
CGAAAGTCGTCGCTGTTTAACGTCGGCCCCTTCTCCGATGCCATCCAGGTTAAAATATTT
GCATATCTTGATCTTCCTGACCTGATGGTGCTACAGAGAGTATGTCAGCACTGGCGGCAG
TTGCTTCTCACGTGTCCTCTCCCTGAGCTGGATCTTAAGCCCTACAATAGATCCATTGAT
GATACATCCATCGTTTCAATCGTCAACTTTGTGGGCGCTCGACCAAAGCTGGTAGACATT
AGCTCCTGTTTCCACCTGACTGATGACGGTTTCTCCTACCTGGTCAACGGCATCGGACTG
GCAAAGATCCGGGTCTTCAAAATGACTTCAGTTTGGGAGGTGTCAGGCATGGCCATCATG
GATCTCACTGTGCCTTCAATTGGAGCTGATCTAGAAGAAGTGGATCTTTCCAACTGCCGT
AAAGTGGGAGATTCGACTCTAGCACGACTAGTGGGATGGGTTCAAGAAGAGGGCGGAGAA
AACAGCGGAGATAGAGAGACGTCACCTTCGTCTTCGGTGGTCGGATGTCCCAAGCTGAAA
CGCATCACCATTAGCTACTGCAAACACATCACCGACCGAAGCATGCACCATATGGCTGTG
TATGCAGCTGATCGGCTGGAGATGCTCAATCTCACCCGATGTACTACAATCACCGACCAT
GGGTTCGGATACTGGAACATCAGGCCCTTTACACGACTCAGGGAGCTGGTTTTGGCGGAC
TGCACATTTCTGTCCGACAAGGCCATCATTTCTATTGTTGGCGCTGCGAAGAATCTCGAG
TTCTTGGACCTATCATTCTGCTGTGCGCTGTCAGACGTATCTGTGGAGGTTCTTTCTCTG
GGATGTCCGTCACTCAAGAGTCTGAATCTGTCCTTCTGTGGCTCGGCCGTGTCCGATGCT
AATCTTCGGGCGGTGGCCATGCATCTTTTGGACCTGGAGCATCTGAGTGTGCGAGGTTGT
GTTCGAGTGACTGCGGTTGGAGTGGATACAATTCTTGCGGGGTGTCTGAAGCTCAAGACG
CTGGACATTACCCAGTGCAAAAATGCTGGTGGTTGGAACCAGGGCGATAGCAAGGTGGTT
GTCAAGACTACCTGAGAGAGGAATGCATATACTAATGATTTATTGTACTTTACGAGGTTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0F01837g_CDS-001

Protein length: 965 aa.
Product: Conserved hypothetical protein

>YALI0F01837g_CDS-001 MAYRRKKFFGKRTEAGHVARTPSQLQEVYSDDDDGEGEDVEMWDQPEVKDTHNADSGSPA
SPAAAMPPRMSDSLYQETKAEAEASAGPQGAPGDLYSLIRTFPLFKMAPNAFVIAVSAKL
RIQQVSPQEYIVTQGDEAKAMYWILKGQVNVTSRDGESVYAELEAGSFFGEIGILFDRPR
TATVLASTKCVLAVLKGDSLNDILPKFPAMERAIRDEAQERLAIIEKTKINQRKSLLTGM
VSPTTSIRNLLHEMPLFRHIPETIVHKLALAVEPRTYEPFQYIIKQDTIGQEIYFLTSGI
VEVIDEREIGTAAHIIARLTKGSYFGEMAFLSSNPVRTASIRSISMVECLVLTTDTLESL
CSQYPDIQQHIEQTASARIEQYHRDPKTHDIINNTTTDTQSAGAGPALPVDMTRRRSVAD
FGGKKNYSLFTVSRGGATFFSEPKDYHISLPGAENTTVSPMTSNHSHTRRYSTGTVFEPV
ISRDGRVVFSNSWESNSGVSEEAPLSLGNYQMAQPRKCLSAGSSGATSPSKRPAFDNRDD
EPLGKDKREMSPRDSSPSSPGAAPLARSSSTGASVKTISPQRYSSFLLHPRLKKQKTFQR
RKSSLFNVGPFSDAIQVKIFAYLDLPDLMVLQRVCQHWRQLLLTCPLPELDLKPYNRSID
DTSIVSIVNFVGARPKLVDISSCFHLTDDGFSYLVNGIGLAKIRVFKMTSVWEVSGMAIM
DLTVPSIGADLEEVDLSNCRKVGDSTLARLVGWVQEEGGENSGDRETSPSSSVVGCPKLK
RITISYCKHITDRSMHHMAVYAADRLEMLNLTRCTTITDHGFGYWNIRPFTRLRELVLAD
CTFLSDKAIISIVGAAKNLEFLDLSFCCALSDVSVEVLSLGCPSLKSLNLSFCGSAVSDA
NLRAVAMHLLDLEHLSVRGCVRVTAVGVDTILAGCLKLKTLDITQCKNAGGWNQGDSKVV
VKTT*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG