YALI0E35046g - SSA6, SSA-D

Overview

Description uniprot|Q6C3G5 Yarrowia lipolytica YALI0E35046g SSA6/SSA-D HSP70 protein
Locus type CDS
Gene names SSA6, SSA-D
Locus tag YALI0E35046g

Location

Species Yarrowia lipolytica Positions 4188319..4190296
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1978 (nuc.)
Previous locus YALI0E35024g Next locus YALI0E35090g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E35046g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E35046gYALI0E35046g_mRNA-001YALI0E35046g_CDS-001

Nucleotide sequence

 

>YALI0E35046g
ATGTCTAAAGCAGTAGGAATCGATCTTGGAACCACATACTCCTGTGTGGCTCATTTCGCC
AATGACAGAGTCGAAATCATCGCCAATGACCAGGGAAACAGAACCACTCCCTCGTTTGTG
GCCTTTACCGACACTGAACGACTCATTGGTGATGCTGCCAAGAACCAGGCTGCCATGAAC
CCTGCAAACACAGTATTTGACGCCAAGCGACTGATTGGCCGAAAATTCGACGACCCTGAG
GTCCAGAACGACGCCAAGCACTTCCCCTTCAAGATTATCGATAAGGCTGGAAAGCCAAAC
ATCGAGGTCGAATTCAAGGGCGAAACCAAGGTCTTCACCCCCGAAGAGATCTCTTCCATG
ATCCTCACCAAGATGAAGGAAACTGCTGAGGGATACCTTGGAACAAAGGTGAACGACGCT
GTCATTACCGTTCCCGCATACTTCAATGATTCTCAGCGACAGGCCACCAAGGACGCAGGT
CTTATTGCTGGTCTGAATGTTCAGAGAATTATCAACGAGCCTACCGCTGCCGCCATTGCC
TACGGTCTCGATAAGAAGGAGACTGGCGAGCGAAACGTGCTCATTTTCGATCTTGGAGGA
GGAACTTTTGATGTTTCTCTTCTGTCTATCGAAGACGGCATCTTTGAGGTCAAGGCCACC
GCTGGAGATACCCATCTCGGTGGTGAGGACTTTGACAACCGACTCGTGAACCACTTTGTT
CAGGAGTTCAAGCGAAAGCACAAGAAGGACATCTCCACCAACCAGCGAGCTCTCCGACGA
CTGCGAACCGCTTGCGAGCGAGCTAAGCGAACCCTTTCGTCTTCCGCTCAAACATCCATT
GAGATCGACTCTCTCTACGAGGGTATTGATTTCTACACCTCCATCACCCGAGCCCGATTC
GAGGAACTCTGTCAGGATCTCTTCCGAGGCACTCTCGAGCCAGTTGAGAAGGTCCTGAAG
GACGCTAAGATGGACAAGGCCTCGGTCAACGAGATTGTCCTTGTTGGTGGCTCCACTCGA
ATCCCCAAGGTGCAGAAGCTCGTTTCTGACTTCTTCAACGGAAAGGAGCTGAATCGATCT
ATCAACCCTGATGAGGCTGTTGCCTACGGTGCTGCCGTCCAGGCTGCCATCCTTTCTGGT
GACACTTCCTCTTCCACTCAGGATATTCTGCTCCTCGATGTTGCTCCGCTGTCTCTGGGA
ATCGAGACTGCTGGCGGTGTTATGACCAAGCTCATCCCCCGAAACTCTACTATCCCCACC
AAGAAGTCCGAGACCTTCTCCACCTACGCTGACAACCAGCCTGGCGTTCTGATTCAGGTC
TTTGAGGGTGAGCGAGCTCAGACCAAGGACAACAACATCCTTGGTAAGTTTGAGCTGTCC
GGTATTCCTCCCGCTCCTCGAGGTGTTCCTCAGATCGAAGTCACCTTCGATGTTGACGCC
AACGGTATTCTCAACGTCTCCGCTGTTGAGAAGGGTACTGGTAAGACTCAGCAAATCACT
ATCACCAACGACAAGGGCCGACTTTCCAAGGAGGAAATTGAGCGAATGGTGAACGACGCT
GAGAAGTACAAGGACGAGGATGAGAAGGAGGCTGCTCGAATTGCCGCCAAGAACGGCCTC
GAGTCTTACACCTACTCTCTCAAGAACACTTTCTCCGAGGAGAAGTTCAAGGAGAAGGTT
GACGAGGCTGAGCGTGAGAAGCTTGAGAAGGCCATCAACGAGACCATTGAGTTCCTTGAT
GCCACTCAATCCGGTGCTACTGAGGAGTACTCCGATAAGCAGAAGGAGCTCGAGGGCATT
GCCAACCCCATTCTGATGAAGTTCTACGGAGCTGAGGGTGGTGCTCCCGGTGGAATGCCC
GGAGGAGGTATGCCTGGTTCTGGAGCCGCTCCTGGTGGCGGCGAGGGTCCCACTGTTGAG
GAGGTTGACTAAGGGATTCCTTGTATATAGATAAAAGTATTTATTGTTTGACTTGTTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E35046g_CDS-001

Protein length: 644 aa.
Product: HSP70 protein
Gene: SSA6, SSA-D

>YALI0E35046g_CDS-001 MSKAVGIDLGTTYSCVAHFANDRVEIIANDQGNRTTPSFVAFTDTERLIGDAAKNQAAMN
PANTVFDAKRLIGRKFDDPEVQNDAKHFPFKIIDKAGKPNIEVEFKGETKVFTPEEISSM
ILTKMKETAEGYLGTKVNDAVITVPAYFNDSQRQATKDAGLIAGLNVQRIINEPTAAAIA
YGLDKKETGERNVLIFDLGGGTFDVSLLSIEDGIFEVKATAGDTHLGGEDFDNRLVNHFV
QEFKRKHKKDISTNQRALRRLRTACERAKRTLSSSAQTSIEIDSLYEGIDFYTSITRARF
EELCQDLFRGTLEPVEKVLKDAKMDKASVNEIVLVGGSTRIPKVQKLVSDFFNGKELNRS
INPDEAVAYGAAVQAAILSGDTSSSTQDILLLDVAPLSLGIETAGGVMTKLIPRNSTIPT
KKSETFSTYADNQPGVLIQVFEGERAQTKDNNILGKFELSGIPPAPRGVPQIEVTFDVDA
NGILNVSAVEKGTGKTQQITITNDKGRLSKEEIERMVNDAEKYKDEDEKEAARIAAKNGL
ESYTYSLKNTFSEEKFKEKVDEAEREKLEKAINETIEFLDATQSGATEEYSDKQKELEGI
ANPILMKFYGAEGGAPGGMPGGGMPGSGAAPGGGEGPTVEEVD*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG