YALI0E34826g

Overview

Description similar to uniprot|P38711 Saccharomyces cerevisiae YHR021C (ohnolog of YKL156W) R27B 40S ribosomal protein S27-B
Locus type CDS
Locus tag YALI0E34826g

Location

Species Yarrowia lipolytica Positions 4152844..4153588
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 745 (nuc.)
Previous locus YALI0E34815g Next locus YALI0E34837g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E34826g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E34826gYALI0E34826g_mRNA-001YALI0E34826g_CDS-001

Nucleotide sequence

 

>YALI0E34826g
ATGGTGAGTGCTGAAGCTATATGATACGGAGAGCACTAGGAGCAGGAGGGCGATAGGGGG
ATTTTCCACAGCGATATTGAGAATATTTCTTTCAGAAGAGCTCAGTTTGGAGCTCACAAC
GACATGAAAAATTTGACGGGAATGGTTAAACGACGTTATCATCACCAAGGATTTGCCACC
TCATCGACACGTCATTCGAAGCCCTTTATGGCAGCTTCATCATCTCCTGCTGCTCCATTC
CTTCCGACACGACGCTTTTCAGACATTTTTACTAACTCAGGTTCTTACTCAAGATCTTCT
CAACCCTTCTCCTCAGTCTGAGGCCCGAAAGCACAAGCTCAAGACTCTTGTCCCCCAGCC
TCGATCCTTCTTCATGGACGTCAAGTGCCCCGGTTGCATCAACATCACTACTGTCTTTTC
TCACGCTCAGACCGTTGTGACCTGCGGCTCTTGCTCCACTGTCCTTTGCCAGCCCACCGG
CGGTAAGGCCCGACTCACTGAGGGCTGCTCTTTCCGACGAAAGTAAATGCAGATCCTTTA
GGAGCATCTAAAATATTAAAAGAGGGGGTGGACTGAAATACATACGAAAATTTGAAATCT
CGATTTGATTGAAATACGAAAGCTGTCTGTAGTGAGACTGTAGTATGCTGTGTTATTATG
TGTACATGTGACACGGGGTACAAGAGCTACAGTAGTACAGCCCAAGACATAATAAATGGA
ATGAATTATATTGAAGAATAAATAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E34826g_CDS-001

Protein length: 83 aa.
Product: Ribosomal 40S subunit protein S27, putative

>YALI0E34826g_CDS-001 MVLTQDLLNPSPQSEARKHKLKTLVPQPRSFFMDVKCPGCINITTVFSHAQTVVTCGSCS
TVLCQPTGGKARLTEGCSFRRK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG