YALI0E34815g

Overview

Description some similarities with uniprot|Q8X0B7 Neurospora crassa Related to phosphatidic acid-preferring phospholipase A1
Locus type CDS
Locus tag YALI0E34815g

Location

Species Yarrowia lipolytica Positions 4148654..4151881
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 3228 (nuc.)
Previous locus YALI0E34793g Next locus YALI0E34826g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E34815g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E34815gYALI0E34815g_mRNA-001YALI0E34815g_CDS-001

Nucleotide sequence

 

>YALI0E34815g
ATGGCCCGTGCTCAGATAAATTGCAGTGAGGGCCTGTTCGACAAACCACCAATTCTCTGT
CTTCAGACAACCATGGCAACTAACGACACAGAGAAGCCCCTGCTAGAACCAGTCACCATC
CGCAAGAACCACCAGCGGTCTCTTTCGGGACAACTCAAGGCCATCTCAGCACCCATGTCA
CCCAAACAGAGGTTCCTCAGCACCTTTGGACTGACGGATGATTCGACCAGAGTGGAGATC
AGTGGAAACGTGGAGGTTGTTGTGGAGGAAACCAGCACTGAGGAGATCACCGCCGTGGCT
GGGAAGGTTGAAGAAGAGGACGAATCAAAGCCTGGGGACGTACCCGAGGCAGAGGAAGTC
GCGGAGGAAGTCGCGGAGGAAGTCACCGAGGCAGAGGCCGAGGCGTCCATGACCACCAAG
ATCATCTCCCAGGACGAGCCAGTGGTTCGACCATGGTTCTTCTACGATGCTCAGGTTGAT
CTGTATGACCCGTTGGCTGAACTTCCTGCCGCCCAGGCCCAAGCTGTGTCTAATGCACAG
AAGGCTACCGGAACCACTACTGCACAAACAGCTGCAGTAGTGGAATCGCTCAGGGACACA
GACGAATTGCCTCCGCTGAAGCCGCCCGTGTTTTCTGCGCTCGGCTATACTGGCAACTTG
GCACCTGACACGTCCTGGAGTGCATTTGCTCCTGCCGATATCAATGCTCTGGAAAAGGCG
TATGGCATCTATTCGGCCGATAAGACTCCTGGTGTCAACGAAGATGACTACCCTGTGAAC
AAGTCTGAGATTCACGAAGAAGATGACTGCAAGGGCACCGAGGATCCCGAAACTGTGGTT
GGAATCAACCGTCTCTATATTGCAAAGTTCTCTCAAGAGGGCCATATCTGCATGCCTCTT
TACTGGCGCACAGTTGGAGACGTCTGTAACGTGCGCCGAAGCACGTGGTTCTTCAGATCG
ACTCTTGGACCAGTTGAGAGATCCCTAGAGCGTCATCTAGAAGAAGCCTTCCAATCAATC
AAGCCTTGGACGTCGGAATACGTTGAAGAGCTTGAAGCTGCCATCTCCAACCCCGAGGCA
GAGTGCAGATTCAAACACTCTTTCACCTACAAGGTCAAGGATGGCGCCAAAGATCCTCCC
ATTGACGTGTCTGTGGTGTTTTCTCCCTGTGCTATGTTTGAAGGAGAGACAGAAGTGACT
CCCAAGGCCCACATTCTGCTGCCCAGTTACTTCAATCTGTTTGGAACTGCTCCTAGTACA
GCACTGTTGGCTACCTCTCTTCTCAAGGGCAGACCTCTTCCTGGATCTCATGTTACCTTA
CAGAGATTCTACGATTGGGACGAGTACAAGAAGTTCAAGACCCTTCCCGACCGACAAGTC
GACGCACTCGATCACGAGTATGCCAAGATCAAGCAGCTCATCTTTGTGCTTCATGGCATT
GGTCAGAAACTGTCTGAGAGAGTGGCATCTTTCACCTTCACTTTTGCCATCAATCATTTC
CGAGTGTTGGTCAAGGAACAGCTCAAGTCGCCCAGAACCAAACACTGTCTTCCCGAAGAC
CGTCAGGATGAAAACTCCATTGCTATTCTGCCCATAAACTGGAGAAGACTTGTTGATTTT
GAAGAGCTGGGCTCTATGCACCGAGAATCCGGTTCTTCAGGGTACTCACTGAAGGATATT
ACTGTCAATTCCATTCCCTCCGTGCGAGGGCTCATTGGAGACGTCCTTCTCGATATCCCC
TACTACATGTCTCATCATAGACCTCTTCTTTTGCATGCTGCTGCCACAGAAGCCAACCGA
ATATACCGCATTTTCTGCAAGCACAATCCTGGGTTTGATGGAGAGAACGGCCATGGCAAC
GTGCATATTATTGGCCATTCTCTGGGATCTGTCATTGCTTTGGACCTGCTTTCTTTCCAG
CCTACAAAGGTGGAAAAGGATGATTTCCAAGACGTGGAGACGCCTGACGTCACCCTGGAC
CTCAAGGTACCTCCCCTGTTCCAGCGAAAGACACACAAGATCCCCAACTTTTGTTTCAAC
ACTTCAAATCTGTTTCTGGTCGGTTCTCCAGTTGGGTTCTTCATGCTTCTTCACAACGCC
AATTTCAAGGCTCGATCTGAGGAGAATGGACCCCAATACGGATGCCTGGCCGTTAAAAAC
CTCTACAATGTCATCAACTTCTCCGATCCCATTGCCTATCTCCTAAATCCCACTGTTGAT
ACTGACTTGGCTGAGAATATTGAGACAGCCAATGTTCCCACAGAAAAGAACTTTCCCTTG
GAGGGAGAAGACGAGTCGTGGATCAAATTCCCCGTCAAGTTCCCCTTCTGGAGTCCCTCA
GGAACCCCTTCTGTGGAAGAGAAGGAGTCTGATAAGGGTGTTAAGGCTGTCAAGGACCTC
TCTGAAGGTTCCAAGGATGCCACAGACACCAAAGACCTCGAGGAATTCTCTGCTTCCGAA
GTCAAGGGGTCTCTGAAACCTCGGCCTAGATCAGACTCCACAAAGTCCGACAAATCCATG
TCTTCTCGACTTTCTGGCATCTTCAGCAGCCGTCCCAAGTCTCCCCTTTCGCCCAACGCC
CGTAAAACCGAGCACAAAAAGAGCCCAATGGCCACCTCGGGCCCCTTCTCTCCCCAGGAA
GTTTCTCCCAAGGACGAGGTGCCCATTTTTACACCCACTCCTGTGAAACCTATGAATGCT
AGTGTGGAGATTGGTGGTTCTCTGATTGGAGAGGGCAATTTGACTTCTTCGCCACCCAAG
TCTATTCCTCTGCAGAAGCGAGACTTTGCTCGGGAGCATCAGGCCGAGCAACAGATGCAG
GGTCTCAATGATAACGGTCAGATTGACTGGATTGTGCCTCTTACCGGAGCTCTGGAGAAC
CAGTACGTGTCCATGATCACTGCTCATTCCAATTACTGGGACAACAAGGATCTGGCTCGA
ATGTGTGCGATTGAAAGTTGTCGAGAGCCCGGTCCTGAACACACTATTGAGCAGTTCCGA
GTGAAGATGAAACCTCGAGCCGCAGAGTCGGAGGAGGCGGTTACAGAGTGAAACAAAGAA
AGGTGAAACTGTCAGCTGAGTACATAAAAATAAATATAGATGTTATGATCAATGTGTGTT
TAGAGATGTAGCTTGGCTGGAGATAGAACTGTAGGGCGACTGAAGAGATCGATACATACT
GTACAGCACTGTAGCTACCAAGAGAGGCAGTTATGGACACAGATTCAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E34815g_CDS-001

Protein length: 1017 aa.
Product: Conserved hypothetical protein

>YALI0E34815g_CDS-001 MARAQINCSEGLFDKPPILCLQTTMATNDTEKPLLEPVTIRKNHQRSLSGQLKAISAPMS
PKQRFLSTFGLTDDSTRVEISGNVEVVVEETSTEEITAVAGKVEEEDESKPGDVPEAEEV
AEEVAEEVTEAEAEASMTTKIISQDEPVVRPWFFYDAQVDLYDPLAELPAAQAQAVSNAQ
KATGTTTAQTAAVVESLRDTDELPPLKPPVFSALGYTGNLAPDTSWSAFAPADINALEKA
YGIYSADKTPGVNEDDYPVNKSEIHEEDDCKGTEDPETVVGINRLYIAKFSQEGHICMPL
YWRTVGDVCNVRRSTWFFRSTLGPVERSLERHLEEAFQSIKPWTSEYVEELEAAISNPEA
ECRFKHSFTYKVKDGAKDPPIDVSVVFSPCAMFEGETEVTPKAHILLPSYFNLFGTAPST
ALLATSLLKGRPLPGSHVTLQRFYDWDEYKKFKTLPDRQVDALDHEYAKIKQLIFVLHGI
GQKLSERVASFTFTFAINHFRVLVKEQLKSPRTKHCLPEDRQDENSIAILPINWRRLVDF
EELGSMHRESGSSGYSLKDITVNSIPSVRGLIGDVLLDIPYYMSHHRPLLLHAAATEANR
IYRIFCKHNPGFDGENGHGNVHIIGHSLGSVIALDLLSFQPTKVEKDDFQDVETPDVTLD
LKVPPLFQRKTHKIPNFCFNTSNLFLVGSPVGFFMLLHNANFKARSEENGPQYGCLAVKN
LYNVINFSDPIAYLLNPTVDTDLAENIETANVPTEKNFPLEGEDESWIKFPVKFPFWSPS
GTPSVEEKESDKGVKAVKDLSEGSKDATDTKDLEEFSASEVKGSLKPRPRSDSTKSDKSM
SSRLSGIFSSRPKSPLSPNARKTEHKKSPMATSGPFSPQEVSPKDEVPIFTPTPVKPMNA
SVEIGGSLIGEGNLTSSPPKSIPLQKRDFAREHQAEQQMQGLNDNGQIDWIVPLTGALEN
QYVSMITAHSNYWDNKDLARMCAIESCREPGPEHTIEQFRVKMKPRAAESEEAVTE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG