YALI0E34485g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0E34485g

Location

Species Yarrowia lipolytica Positions 4096234..4098210
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1977 (nuc.)
Previous locus YALI0E34463g Next locus YALI0E34507g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E34485g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E34485gYALI0E34485g_mRNA-001YALI0E34485g_CDS-001

Nucleotide sequence

 

>YALI0E34485g
ATGGCTATCTCAGACATTATCACGGCTGCCTACAACGGCTTGAAGAGCGTGGCGAGCAAG
AAGAACGAGGATCGGACTCCTGACACCCAGGTCCAGGTTCCCCAGAACATTCAGCTCGAG
GTTTCCCAGAACCTGTCTCTGGACCCTCTCATCAAGTGGGCCGAGAATGAGCTGGTCAAG
CTGGCAATGCTCCCCATCTGCGAGGCCGTTCTGCTGGGCCTGACTGTTCTCAAGGGTGTG
GCTAAAGTCGACAAGCGAGCAGTCCCTCTGATCCTTGTAGGAGCCTGTGATCTGCTCCAC
CCTGTTATCGAAAAAGCTATCGGATACTCTTTCGACTGTGAATACATGCAGGGCGACTCC
ATTCAGCGTGGAAACACTGGAAAGTCTTTCACCAACGTTCTGACTCTCATGGACACTATG
GGAGACGACGGAAAGGCCTTGCGATACTACCTCATGGGTCTCACGCAATGTGGAAAGCCC
GACACTCCCTACATTGACACCTCTAAACTGGGCTGGTACCCTCCCAAGCCCGATAACATC
ACCATTGCTCCTTCTTCTAACGAAACTTTCAACGTCCTCCACATCTCCGACTTCCATCTC
GATCTCAAGTACCAGATTGGAGCAGAGTCCCAGTGCGACTACTACATGTGCTGCACCGAC
CTCTCCAAGAACCAGACCGCCATCAACGCTGGTTTCCACGACCCTCTGATCCCTGCCCAG
TCCATGGGAACTTACCAATGTGACTGTCCTCAGTCTCTGATGGAAGATTCCCTCCAGAAC
GTAGTTGACATCAACAAGGACAAGAAATTCGAGTTTGGAATATTCACTGGTGATATGGTT
GCCCACGACCCCGATGAGTACTACAGCAAACAGAATGTCCAGGATAACGAGGAGCAGGCC
TACAAGAACCTGAAGCAGTACCTTGGTGATCTCCCCATTTACGCCACTTTCGGAAATCAC
GACACCTATCCTAACTCCCAGTTTGCCCAGGACAAGTCTGGCTTTGGAGGTGAGTTCCAA
TGGAACACCGACCTTGTTACTGGGCTTTGGAAGGATTATGGCTGGATTGACGAGGCCGAG
GCCAGCAATGCTGCACACACTGTTGGATCCTTCGCCGTCACCACCAAGAGAGGTCTGCGA
GTCATCTCTCTCGACTCCAACTTTTGGTACAAGATGAACCTATACAACTACTGGAACATT
GCCGACCCCGATCCCTCTGGTGTGTTCAAGTGGTTCGTTGACGAACTTGTGGAGTCCGAG
AAGAAGGGAGAGCGAGTCTGGGTTGTCACCCATGTCCCCACTGGCGGAGCTGGAGATGGT
CTCCCTTGGTCTTCTGAGGTTATGCGGCAGATCATCGTTCGATTCTCTCCTCATGTGATT
GCCGCTGTATTCTACGGACATACTCATGCTGATCAGTTCACCGTCTACTATGACACTCCC
CATGGATCTACTGACATGACTGACCCTCTTACCACTGGCTGGATTGTTCAGTCTATTACT
CCTGTCGACTTCTACAACCCTTCCTGGAGATACTACGAGGTGGATTCCAAGACTTTTGAG
ATCATGGACTCCAAGAACTACTACACCCAGTTGGACCAGACCTTTGACTACGATCTGAGC
AAGCCTTACCTCGCTAACGCCTCCTCTTCTTTCCCTCATGTTGGATATGAGCCTCAGACC
CCTGCTAATGCCAAATGGGAGTTCCTGTACTCTGCTCGAGAAGCCTACGATCCCCACAAC
AACTGGCCCAAGGACGCTCCTCTGAACGCCACCTTCTGGGACCGAGTCATCAAGAACATC
CAGAGCGACCCCCAGCAGCTCGAGACCTTCTACGATAACTGGTTCCGAAAGTCTCCTTAC
ACCAAGCAATGCTCTGGCGGTGACTGTGCCAAGGATACTGCCTGTTTCCTTGCCGGTGGC
TCTTGGGACTCCCTTTACAATTGCGAGGGCAAGTCTCCCATTCGTGGTGGAGAGTAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E34485g_CDS-001

Protein length: 659 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0E34485g_CDS-001 MAISDIITAAYNGLKSVASKKNEDRTPDTQVQVPQNIQLEVSQNLSLDPLIKWAENELVK
LAMLPICEAVLLGLTVLKGVAKVDKRAVPLILVGACDLLHPVIEKAIGYSFDCEYMQGDS
IQRGNTGKSFTNVLTLMDTMGDDGKALRYYLMGLTQCGKPDTPYIDTSKLGWYPPKPDNI
TIAPSSNETFNVLHISDFHLDLKYQIGAESQCDYYMCCTDLSKNQTAINAGFHDPLIPAQ
SMGTYQCDCPQSLMEDSLQNVVDINKDKKFEFGIFTGDMVAHDPDEYYSKQNVQDNEEQA
YKNLKQYLGDLPIYATFGNHDTYPNSQFAQDKSGFGGEFQWNTDLVTGLWKDYGWIDEAE
ASNAAHTVGSFAVTTKRGLRVISLDSNFWYKMNLYNYWNIADPDPSGVFKWFVDELVESE
KKGERVWVVTHVPTGGAGDGLPWSSEVMRQIIVRFSPHVIAAVFYGHTHADQFTVYYDTP
HGSTDMTDPLTTGWIVQSITPVDFYNPSWRYYEVDSKTFEIMDSKNYYTQLDQTFDYDLS
KPYLANASSSFPHVGYEPQTPANAKWEFLYSAREAYDPHNNWPKDAPLNATFWDRVIKNI
QSDPQQLETFYDNWFRKSPYTKQCSGGDCAKDTACFLAGGSWDSLYNCEGKSPIRGGE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG