YALI0E34463g

Overview

Description some similarities with uniprot|Q1K741 Neurospora crassa NCU06697
Locus type CDS
Locus tag YALI0E34463g

Location

Species Yarrowia lipolytica Positions 4089292..4093074
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 3783 (nuc.)
Previous locus YALI0E34441g Next locus YALI0E34485g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E34463g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E34463gYALI0E34463g_mRNA-001YALI0E34463g_CDS-001

Nucleotide sequence

 

>YALI0E34463g
ATGGTAATCCCAGGGATCCTCCAGTCAGGCTTTAACTTCGTCAAGGAGACCGGAGCCAAG
CTCCTGCCTCGTCAATTTCTCAGCGATCTTGGAGGAGGAACCTCTGGAACAGGTTTCGCT
GGACTTTTCGACGGTATTTTCTCAGATGATGGAAGTCTCGATCTCGGAGCGTTGTTGTCA
GGCCCTTTGGGCTCTGGAATTGGAAAACTGATGCCTTACGTGCTAGGATTTTCAAACGTC
AAGAAGCCTGCCTCTAATGACGATGCTGCTGGTCTTGCTGAGTGGGCTCTCCAGAACACC
GTTCAAGAGCTGATTGCAGCTTTTACTGATAAGACAAAAACTACCTGTGACGTTGCCCTC
GAAGGACTCTCTCTGCTTAAGGATCTTGCTAAGATGAACAAAAAGGCCCTTCCCATTCTT
CTCGTCAACTTTTGTGATATGTTCCATGACCCTCTCCAGACTGCTATTGGTTTCAAGATT
GATTGTCAGTTCCTGCAAGGTGAATCCATCGCCCGTGGAAACACCGGATCTGCTTTCGCT
AACGTTCTCACTATCATGGATACTGAAGGCGATGATGGTAAAGCCCTACTCTATTATCTC
TTCGGTACCGACATTTGTGGAAAGCCTGAAACTCCTCTAATCAATGTCGACAGTCTTGGC
TGGTACCCTGAGAAGCCCACCAACCCCGTCATGCCTGTTTCCAAGGGAAACACCATGAAC
GTACTTCACATTTCCGACTTCCATCTTGATCTCAAGTACCAGATTGGAGCTGAGTCTCAG
TGCGATTACTACATGTGCTGTACCGATCTTTCCCAGAACCTGACTGCTCTTGCCAATGGA
TTCACTGAGGTTCTCATCCCTGCCCAATCTCTCGGAACCTACCACTGCGATTGTCCCGAC
TCTCTCATGAAGGACTCTCTCCAGAACGTTGCTGATGTTCACAAAGACAAGAATTTCGAG
TTCGGAATCTTCACTGGTGACATGGTTGCTCACGATCCCGATGAGTACTACAGCAAGCAG
ACCGTTGAGGATACCGAGACCCAGGCCTTCATGAACATGAAGCAGTATCTTGGAGACATG
CCAGTCTACGCAACCTTTGGAAACCACGACACTTACCCGAACTCTCAGTTCGCCCCGGCC
AAGTCTGGTTTCGGAGGTGAGTACCAGTGGAACACTGATCTTGTTACTGGGCTCTGGAAG
GATTACGGCTGGATCGACGACGAGACTGCCACAAATGCCCGAAACACTGAGGGATCTTTT
GCCGTCACTACCAAGCATGGTCTTCGTGTCATTTCTGTGGACTCCAACTTCTGGTACAAC
AAGAACGTCTACAACTACTGGAACATCAGCGATCCCGACCCATCCGGAATCTTCGAGTGG
CTGTCCAAGGAACTGACAGAGTCTGAGGCTCGTGGAGAAAGAGTTTGGATCATCACTCAC
GTTCCTACTGGTGGTGCTGGTGACTCTCTGCCTTGGAGTTCCGAGATTATGCGACAGATC
ATTGTTCGATTCTCTCCTCACGTCATTGCTGCTGTTTTCTACGGACACACCCATGCAGAC
CAGTTCACCGTCTACTACGACTCTCCTCAGGGTTCCACAGAGTTGACCAATCCTCTTACC
ACAGGTTGGATTGTCCAGTCTATCACTCCTGCTGACTTCTACAACCCCTCTTGGAGATAC
TACGAGGTCGACTCTGACACCTTTGAGATCATGGACTCCATCAACTACTACACCCCTCTT
GAGGAGACTTTTGACTACGATATCAAAAAGTCTGTCCTTGTCAACGAGACTTCTTCCTTC
CCCCACATGGGCTATGAGAAGCAGATCCCGGCAGAGAACACCAACTGGCAAGAGCTCTAC
TCTGCCCGAGAGGCCTACGACCCCAAGAAGGAATGGCCAAAGAATGCTCCTCTCAATGCC
ACTTTCTGGGACCGTGTCATCAACAACCTGCGAACTGATGACGAGCAGCTTTCTCTCTTC
TACGACAACTGGTGGCGAAAGTCTCCTAGCACCCGATTGTGTCTCAATGATGATGTCGAT
TGTATCAAGGAGACCACCTGTGCCCTCATTGGTGGTTCTTGGGACATTCTTCACAACTGT
AAGACTGGTGATCTTCCTCCCGTGAAGGTACTGGCTGACATTCCTGTCGAGGCTGATGAT
GATGTATCTACTTCTTCCACTTCCGCTTCTTCTTCTGGTTCTTCAGCCATTGAAGTCTCC
ACTTCCGTTTCTTCTTCTTCTGCTGCTGATGTATCTGCCTCTGCCTCTGCCTCTGCCTCT
GCCTCTGCTTCTGCTGCTGATGCCGATGTGTCTGACTTCTCTTCATCTGCTGAGGTCTCC
ACTTCTGCTGTTGCCACTTCTGCTTCTTCTGCTGAGTTCTCCTCTTCTGCCGCTGCTGAG
CCCTCCAGTTCTGTTGAGACCTCCAGTTCTGTTGAGACCTCATCGCCTGCTGAGACCTCA
TCGTCTGCTGAGACCTCATCGTCTGCTGAGACCTCATCGTCTGCTGAGACCTCATCTTCT
ACTGAGACCTCATCGTCTGCTGAGACCTCATCTTCTACTGAGACCTCATCGTCTGCTGAG
ATCTCCTCTTCTGCTGTTGTTGAGACCTCCTCCTCTAGAGCTACCGAAACCTTTGCTCCT
GCTTCACCTGCTGAGATTGAGGTGTCCTCTTCTACTTCTTCTGCTGCTGCCGATACCTCG
GATTCCACTGCTGCTGCCGACGCACCCATTGCTTCCTCTGTTTCTGCCTCTGGTTCTCAA
GAGCTTGCCGGATCTGTCTCCGTCTCCGTCTCTGCCTCCAACACAGCTGCTTATGCTCCT
TCTAACTTTGCGACTGCTACTGGAAACACCACCACCTCTGTTGCACCTGGCTCTGCTTCT
TCCACCTCTATAGTCTCTTCTTCTGGAGCTTCTGACAGCCAGGCCGCTGTTTCTGTTTCT
GCCGGATCCAACTCTAACGCTGAGAGCAATGCCAACATTGTCACTGATCTGTCTGGATCC
AATGGTTCTCAGGGTGCTGATGTCGAGTCTCAGAAGATCACTTCCACTCACACTGTCACT
GCAACCTATTGCCCCCCTTGTGCTGCTGGCTCCAAGTGGCAGCATCCCACCGGCGCTCAT
ATTCCTGGCGTTACTACTGCCACCGTCACCAGCGCTACCAAGACCGTCACAGTCTACTGT
GAGACTTCTGGCTCTTCAACTCTGCTCTACGGCACCGAGAAGACCAAGGAAGAGGGTGTT
GCCGTGGTTACAGTCACCAAGGACGCTAGAAAGGCTGCTGTTGGCGCCCAAGACATCACC
AAGACAGTCACCGTCTCTTGCTTCTCTTCTGGCTCCTCTACTTGGTACGAGCCTGAGGTA
ACCGAGGCAGGTGTTCATGTTGTCACAGTTACTCCTGGTGTTTCTGCGAAGGCCAAGTCT
TTTTCTGCCCCTGCCGACAAGCCCAAGACAGACTCCCCCAAGGCTTCTCCTGTTGCTTCC
AACCTGGCTTCTGCGTCCGGATCTCCAAGAGCTGCCTCCAATGTTGAGTCTCCCAAGGTT
GAGTCTCCTAAGGCAACTGGAACTCCTAAGAACACTGCTGCTACCAACGCTACCAATACC
TCTCCAGTTGCTCCTGCGGCCTCTTCCAAGGCCGCTACTGCCTCTGCACCTGCTACTGGC
TCTCCCGCTGCTACTCCTGCACAGGCCAGCGCCTCTGCACCCAAACAGGCCAGCGCTGGA
TCTATGGTTAAGCCCGCCATGGCTGCTATCGGTATCACTTTTGTCGCCTCTCTGCTGATC
TAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E34463g_CDS-001

Protein length: 1261 aa.
Product: Conserved hypothetical protein

>YALI0E34463g_CDS-001 MVIPGILQSGFNFVKETGAKLLPRQFLSDLGGGTSGTGFAGLFDGIFSDDGSLDLGALLS
GPLGSGIGKLMPYVLGFSNVKKPASNDDAAGLAEWALQNTVQELIAAFTDKTKTTCDVAL
EGLSLLKDLAKMNKKALPILLVNFCDMFHDPLQTAIGFKIDCQFLQGESIARGNTGSAFA
NVLTIMDTEGDDGKALLYYLFGTDICGKPETPLINVDSLGWYPEKPTNPVMPVSKGNTMN
VLHISDFHLDLKYQIGAESQCDYYMCCTDLSQNLTALANGFTEVLIPAQSLGTYHCDCPD
SLMKDSLQNVADVHKDKNFEFGIFTGDMVAHDPDEYYSKQTVEDTETQAFMNMKQYLGDM
PVYATFGNHDTYPNSQFAPAKSGFGGEYQWNTDLVTGLWKDYGWIDDETATNARNTEGSF
AVTTKHGLRVISVDSNFWYNKNVYNYWNISDPDPSGIFEWLSKELTESEARGERVWIITH
VPTGGAGDSLPWSSEIMRQIIVRFSPHVIAAVFYGHTHADQFTVYYDSPQGSTELTNPLT
TGWIVQSITPADFYNPSWRYYEVDSDTFEIMDSINYYTPLEETFDYDIKKSVLVNETSSF
PHMGYEKQIPAENTNWQELYSAREAYDPKKEWPKNAPLNATFWDRVINNLRTDDEQLSLF
YDNWWRKSPSTRLCLNDDVDCIKETTCALIGGSWDILHNCKTGDLPPVKVLADIPVEADD
DVSTSSTSASSSGSSAIEVSTSVSSSSAADVSASASASASASASAADADVSDFSSSAEVS
TSAVATSASSAEFSSSAAAEPSSSVETSSSVETSSPAETSSSAETSSSAETSSSAETSSS
TETSSSAETSSSTETSSSAEISSSAVVETSSSRATETFAPASPAEIEVSSSTSSAAADTS
DSTAAADAPIASSVSASGSQELAGSVSVSVSASNTAAYAPSNFATATGNTTTSVAPGSAS
STSIVSSSGASDSQAAVSVSAGSNSNAESNANIVTDLSGSNGSQGADVESQKITSTHTVT
ATYCPPCAAGSKWQHPTGAHIPGVTTATVTSATKTVTVYCETSGSSTLLYGTEKTKEEGV
AVVTVTKDARKAAVGAQDITKTVTVSCFSSGSSTWYEPEVTEAGVHVVTVTPGVSAKAKS
FSAPADKPKTDSPKASPVASNLASASGSPRAASNVESPKVESPKATGTPKNTAATNATNT
SPVAPAASSKAATASAPATGSPAATPAQASASAPKQASAGSMVKPAMAAIGITFVASLLI
*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG