YALI0E34419g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0E34419g

Location

Species Yarrowia lipolytica Positions 4086763..4087800
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1038 (nuc.)
Previous locus YALI0E34397g Next locus YALI0E34441g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E34419g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E34419gYALI0E34419g_mRNA-001YALI0E34419g_CDS-001

Nucleotide sequence

 

>YALI0E34419g
ATGAATGAGTTCCAACAGAAAGTCCAGCAGTACAAAGAGTATAGCCACCTCTACCATCCT
CGCCCTAAAGCACCTCAATTCAACAATCTCCCTTCTCACCATCCAACTCAAGGTCCTTTC
TACTACACCGCAGGTGACACAAAAATCGACACTGCCCCTGTTGGCCATTATTTCCCTGCA
AGTTTAGTAGATGGAACAAATGGTAAGCCAAGGGACTACCCCTGGGCTCCCTCGGGTCAC
GTGGATCCTCTTTATTACTGTTCTGATGAGGTAACTCAGGCCCAGGGATACGAAGTTGAT
CTGGGCTCGAATCAACCACCTGACTACTACAGGAACATGTCTCGATGTCTGGAAGCACCA
AAAAACGTCTCTATCAACGACGGCACCCGCTTGCTTCTCTCTCAGCCTGTATACACTGAT
ATCCTTCGGTATGCGGAAGACCTGAGCTACGAAAGAAGAGTAGTCTCGGCAGCGGTATAC
AACTCCTATCCTCAAAATACAAGTTATCCAATCACCCAAGCACTCTACTACCCAGTTCAG
CAAGTCTACCTGTCAGCCTATCACTCATGGCCACCGGACACATCTAACAATCATGCAAAA
AAGCCGCGGCTGCTCAACCCCAGAGTGAAGGCTCTAAAGCGAGAGCACAACCAGTCAGCA
TTTTGCTCTAGTGCTCCGGTTACCCAACAAGACAGACCTTTCCTGCCTTCGTTGCAAGAC
GAAGAAGACTTATCAGTTACACCTATAGCAGAGTATGACGATACTGACTCCTTTGACAAA
GAGTTCGAGCTGCTCAACAGGGCAATCAGCTACTTCGTGCGGTACATTAAGAGAGCCCAC
ATGGATCCCAATGACCATGGAGACTTCTCTTCAGACTCCTCCATGGGCAGTATATACACT
GAAGAAAGTACTGATCCTGAACTTGAAGCAGGCTCATTTGAACAGACAGACACCAAAGAG
TTCGCCGATCCATCGCCACGATCAACCAACACACTCCACTCCATGCTGGCACTTTTTAAT
CCCCCTCTTAGCTCATAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E34419g_CDS-001

Protein length: 346 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0E34419g_CDS-001 MNEFQQKVQQYKEYSHLYHPRPKAPQFNNLPSHHPTQGPFYYTAGDTKIDTAPVGHYFPA
SLVDGTNGKPRDYPWAPSGHVDPLYYCSDEVTQAQGYEVDLGSNQPPDYYRNMSRCLEAP
KNVSINDGTRLLLSQPVYTDILRYAEDLSYERRVVSAAVYNSYPQNTSYPITQALYYPVQ
QVYLSAYHSWPPDTSNNHAKKPRLLNPRVKALKREHNQSAFCSSAPVTQQDRPFLPSLQD
EEDLSVTPIAEYDDTDSFDKEFELLNRAISYFVRYIKRAHMDPNDHGDFSSDSSMGSIYT
EESTDPELEAGSFEQTDTKEFADPSPRSTNTLHSMLALFNPPLSS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG