YALI0E34397g

Overview

Description weakly similar to uniprot|I2GWA9 Tetrapisispora blattae hypothetical protein TBLA_0A06190
Locus type CDS
Locus tag YALI0E34397g

Location

Species Yarrowia lipolytica Positions 4085226..4086762
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1537 (nuc.)
Previous locus YALI0E34375g Next locus YALI0E34419g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E34397g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E34397gYALI0E34397g_mRNA-001YALI0E34397g_CDS-001

Nucleotide sequence

 

>YALI0E34397g
ATGGAAGGATTATTCTCGTGGGCTAAGGACAATGGCGCCAAGATCTCTGAAGAAATCGAG
GTTTCGAATCTCCCGGACTTTGGAGACTCGATTGTGGCCAAGGCCGCTCTCAAGGACCAG
GAGCTGATCAACATCCCCACTAAGCTCATCATCAACCACGAGAAGGCCGTCAAGGAGTTT
GGAGCCGCCTCCAGCACTTTCAGCACTGTCGCTGACAAGCAATCGCTCACCAAGTACTTT
TTTGCTGTAGAGAAGAACAAGGGATCCGACTCCTTTTTCCACCCTTACATCAGCCAGCTT
CCCAAGAAGGTGACGACTCCTCTCTATTTCACACCTGAGCAGCAGGAATCTCTTGTGGGC
ACCAATCTGGAATTCTATAAGAACGACAAGACCGAGCTGTGGGAGAAGGAGTTCAAGAAG
CTGCAGCAGTTTGTCAAGACCTCTGTCACCCTTGAGGACTACCTTTACGCCTCTACAATT
TTCACATCTCGAAGCTTCCCCGAGCGGCTCATGGACCCCAAGAACGAGGATCTGTCCATG
CTCATCCCTGTGTTGGATCTCATTAACCATAAACCCCTAACTGCCGTTGAGTGGAACGTC
ACCGGTGACGCCTTTGCCTTCAAGGCTTGCTCGGACGTGGTCAAGGGGAGCCAGGTCTTC
AACAACTACGGTTCCAAGGGCAACGAAGAGCTTCTGGGAGCTTACGGATTTGCTCTCAAG
GACAACGAGTTCGATACTATGCCTCTCAAAGCTGTTATCAAGGGAGAAACCATCTTCGAC
CGAATCGGATACAAGCTTGGTCTGCCTGAGAAGCTGCTTACTGCTCTGGACAAGGTCATT
TTCTCTTCGCCTATTGCTAAGAAGTCTACTCTTGGCCGAGAGCGTCTCCTTTACCTCCTG
TACTCCACTCTGAGTGACAAGCTCGCTCGACTCATGGGAGACGAGGATGAGGAAGAGGGT
GATGAGGATGAGGAGCCTCCTGCTCCTGAGACCTCCCCTGAGAACTTCATTCATTACTAC
AAGCAGGGTCAGATCCGAATTCTCACCGAGACTCTCATTACCATCCAGGAGGAGATTCAG
GGTCTGGAACCCAAGATCCTTGAGATGCCTTCTATTAACCACCAGGACGTCCTGGAGTCT
GGTAATGAGAAGCTGACCGACACTTTCGCCGATGTGTTCGCTGAGGGTATCGACATTGAG
GAGCTCTTCATCTTCACTATTGCTTGGATGCTGCAGTACCCCGAGGTGAAGTGGAACGAG
AAGCTGACGAAGTTGCAGATCTATATCAAGGAGAAGGCTCTGCCGTTTCTGATTGAGGCC
GAGAAAAATGGCGAAGACAAATACTCCGAGGACTTTGTTGGTTTCTACGACGAGATCATT
GTCCAGAACAACCTCAAGTTCGATAAGCAGAACATTCTGCGAGCCGGTGTCATTTTCGAG
GAGATCTACTCTCAGGACTCTCTTCGTCTGCTAAACTAGAGGACGTTGTGGGTTGCAATA
AGCTGTATAGATGTTAATACATAAATTATAGAGAGAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E34397g_CDS-001

Protein length: 493 aa.
Product: Conserved hypothetical protein

>YALI0E34397g_CDS-001 MEGLFSWAKDNGAKISEEIEVSNLPDFGDSIVAKAALKDQELINIPTKLIINHEKAVKEF
GAASSTFSTVADKQSLTKYFFAVEKNKGSDSFFHPYISQLPKKVTTPLYFTPEQQESLVG
TNLEFYKNDKTELWEKEFKKLQQFVKTSVTLEDYLYASTIFTSRSFPERLMDPKNEDLSM
LIPVLDLINHKPLTAVEWNVTGDAFAFKACSDVVKGSQVFNNYGSKGNEELLGAYGFALK
DNEFDTMPLKAVIKGETIFDRIGYKLGLPEKLLTALDKVIFSSPIAKKSTLGRERLLYLL
YSTLSDKLARLMGDEDEEEGDEDEEPPAPETSPENFIHYYKQGQIRILTETLITIQEEIQ
GLEPKILEMPSINHQDVLESGNEKLTDTFADVFAEGIDIEELFIFTIAWMLQYPEVKWNE
KLTKLQIYIKEKALPFLIEAEKNGEDKYSEDFVGFYDEIIVQNNLKFDKQNILRAGVIFE
EIYSQDSLRLLN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG