YALI0E34309g - SRP72

Overview

Description uniprot|Q6H9R9 Yarrowia lipolytica YALI0E34309g SRP72 Signal recognition particle protein
Locus type CDS
Gene name SRP72
Locus tag YALI0E34309g

Location

Species Yarrowia lipolytica Positions 4076488..4078503
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 2016 (nuc.)
Previous locus YALI0E34287g Next locus YALI0E34331g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E34309g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E34309gYALI0E34309g_mRNA-001YALI0E34309g_CDS-001

Nucleotide sequence

 

>YALI0E34309g
ATGGATCTCACGACTCTGATCGACAAGCTGAACGTGAGCAGTGCCGCCTCGGCCCACGAC
CAGGCGTACTCGTTCGCGTGCCAGGCCGAAAAATATGACCCCAAGGACCTCAACATCCAG
CGACACAAGCTGGTGGCTCTGATCCATCTGGAAAAGTTTGACGAGGCCGAGCAGGTTCTC
CAGGACAAGGGAACCACTGGCCTGGAATTTGAGGCCGCCTACATCTACTATCGCCAGGGC
AAGCACGCTGAGCTCGCCAAGGTGCTGGAGACGGCCCAGAAGGATACACGGCTGATCCAC
ATTGCTGCGCAGGCTGCGTACAAGGAGGAGGACTTTGACCGAGCCTACGAGCTCACACAG
GAGCTGCTGGGCACCGGAATAGACGAGCTGGATCTGCTTGTCAATGAGTCCGCCATCGTT
GCCCAACAGGCGCTGCACAGACAGGGAGTGTTCCCCCTGACCATGACATCCACAGCCAAG
TCGTCACACGACTTCCTCTTCAACCGGGCCATCGCCGAGCTCAGTGAGGGCCGGTATGAC
TCAGCGCTCGATCTACTGTCGCAGGCCCAGGTCGCGTGCTCCGAGGCAGACATGCCCGCG
GAGGAGATTGACACCGTCAAGATCCAGGCTGCATACATTCACCAACTCAAGGGCGACACT
GCTGAGGCCAAGCGAATCCTAGACTCTGTTGCCGAGTCCGGCTCGCATCTCAGTGGTCTG
ACCGATCTCGTTGCCGCCAACAATGCCGTCACGCTGTCTCCCGATATCACTTTCAACCCC
AACGTGGCTCTGCGAAAGCTGCAAGACCACGGCCTGGGTCTGTCTTCCACCGCCAAGGGC
CCCACTGCCCCCAACGGACCCGCCATCCAGGCCCAGCGAAAGGTGTTTGCCCTCAACCGG
CTGATTCTAGAGGGATCAGCTGGCAAGGACACTTCTAAGCTGGCTAAGAAGCTCACCCGA
ACCTACCCTGGTCTCGTGTCTGCCCAGGTGGTTGCTGCTACCAACGGAAACAGCGATCTC
GAGGACCTCATAGAAACTCTGCGAAAGCGGGACCCCAAGTGCACCAACATTGGCTCTGTT
CTTGCCATTGCACAGGCCTACGTTCTGACGGGTCGTCTGCAGGCAGCCTACGACGCTCTG
ACCACCTACATCAACTCCCTACCCGAAAACCTGGCTCCCTACCCTGGTCTGATTGCAGCT
ACGTCGTCCATCGCGCGTCTCATGGGTAAGAAAAAGCTGGCTCTCAAGCTCATCGAGAAG
GCCAACACCCAATGGCAGAAGAACAGCGCCCCCTACTCTGCCTCCCTGGCATACGCTCTG
TCGCTGCTCGAGAGCAATAAGCCCTCCAACCAGAAGAAGGCCAAGAACCTGCTACTCAAG
CTGGTGGAGAAGAAGCCCCGAGACGAGATTCCCCGAATCGCTCTGTCTGGAGCTCTGGGC
ACCCAGGAGGTTCTTACCCGAGAGATTCCTGATCTCATTTCTGGTGTCGATGTAGACAAC
CTCGAGGAGGTCGGCGTCATTATCCCCCAGTCTAAGAAGCGATCTGCCGAGGTGTCTACT
AAGACTTCCAAGAAGCGAAAGACCAAGATTCCTGCCAACGCCGACCCTGCCGTGACCCCC
GACCCTGAGCGATGGCTCGCCAAGCGAGACAGATCCACCTACAAGCCCAAGAAGGTCAAG
GGAAAGAAGGTGCAGAACACTCAGGGAGGAGCTGTGGACGACTCGCTGGAGCTGGGAAGC
AACACTGCCGAGAAGACCACTGTGGTCAAATCCAAGGCCAAGGGCAAGAAGAAGAAGGGA
AAGAAATAAGCGGTGAAGGCTCAAAAATGGTTACATGTATGAAATACAGGTGTATTATAT
TCGCTTTGGGTATAGTAGGTAATCATGTCTAAAGTCATGGAAAGCTGTTACGTATGTCCA
CGTATACGGTAGCTATAGCTGATTATTTTTAATCCTGTAGTAATGTGACATAGACACGAA
ATCTCGTCTATAGTAAATTCAAATCCATTCATTATT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E34309g_CDS-001

Protein length: 603 aa.
Product: Signal recognition particle protein
Gene: SRP72

>YALI0E34309g_CDS-001 MDLTTLIDKLNVSSAASAHDQAYSFACQAEKYDPKDLNIQRHKLVALIHLEKFDEAEQVL
QDKGTTGLEFEAAYIYYRQGKHAELAKVLETAQKDTRLIHIAAQAAYKEEDFDRAYELTQ
ELLGTGIDELDLLVNESAIVAQQALHRQGVFPLTMTSTAKSSHDFLFNRAIAELSEGRYD
SALDLLSQAQVACSEADMPAEEIDTVKIQAAYIHQLKGDTAEAKRILDSVAESGSHLSGL
TDLVAANNAVTLSPDITFNPNVALRKLQDHGLGLSSTAKGPTAPNGPAIQAQRKVFALNR
LILEGSAGKDTSKLAKKLTRTYPGLVSAQVVAATNGNSDLEDLIETLRKRDPKCTNIGSV
LAIAQAYVLTGRLQAAYDALTTYINSLPENLAPYPGLIAATSSIARLMGKKKLALKLIEK
ANTQWQKNSAPYSASLAYALSLLESNKPSNQKKAKNLLLKLVEKKPRDEIPRIALSGALG
TQEVLTREIPDLISGVDVDNLEEVGVIIPQSKKRSAEVSTKTSKKRKTKIPANADPAVTP
DPERWLAKRDRSTYKPKKVKGKKVQNTQGGAVDDSLELGSNTAEKTTVVKSKAKGKKKKG
KK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG