YALI0E34287g - NIP7

Overview

Description uniprot|F2Z5Z4 Yarrowia lipolytica YALI0E34287g NIP7 Protein required for efficient 60S ribosome subunit biogenesis
Locus type CDS
Gene name NIP7
Locus tag YALI0E34287g

Location

Species Yarrowia lipolytica Positions 4075813..4076523
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 711 (nuc.)
Previous locus YALI0E34265g Next locus YALI0E34309g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E34287g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E34287gYALI0E34287g_mRNA-001YALI0E34287g_CDS-001

Nucleotide sequence

 

>YALI0E34287g
ATGAGACCTCTGACCGAAGAAGAAACGAAAACCGTGTTCGAGAAGCTCGCCAACTACGTT
GGACGAAACATCTCGCACTTCATCAATAACGAAGACCCTCACGTGTTCCGGCTCCAGAAG
GACCGAGTCTACTACGTTGAGGAGAAGATTGCCAAGTATGCCACCTGTGTGTCTCGAGCC
CAGCTCTTCTCCGTTGGCACCTGTCTCGGCAAGTTCACCAAGACCGGCAAGTTCCGACTT
CATATCACCGCTCTTCCTCTCCTCGCTGCACATGCTCGACACAAGATCTGGATCAAGCCT
AACGGAGAGATGCCCTTCCTCTATGGTAACCACGTTCTCAAGGCCCACATCGGTAAGATG
AGCGACGACATTCCCGAGCATGCCGGAGTCATTGTCTACTCCATGAGCGATTCTCCTCTG
GGCTTTGGCGTCAGTGCAAAGTCTTCTCTGGAGGTCCGACGTCTGGACCCCACTGGTATG
GTTGCTTTCCGACAGGGAGATGTCGGCGAGTACCTGCGAGAGGAGGACACTCTTTTCGCC
TAAGCAAAGAGGTACGCTACGGAATTGGGGGTTGTTTTATAGATGGAGGCAAAAAAAACT
GACACGCATCAGCACAAACGGGCTTCAATGTGCGTTTTGTGCATCTACCATGGATCGGTC
TTTATCGGTCAATAAAATAATGAATGGATTTGAATTTACTATAGACGAGAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E34287g_CDS-001

Protein length: 181 aa.
Product: Protein required for efficient 60S ribosome subunit biogenesis
Gene: NIP7

>YALI0E34287g_CDS-001 MRPLTEEETKTVFEKLANYVGRNISHFINNEDPHVFRLQKDRVYYVEEKIAKYATCVSRA
QLFSVGTCLGKFTKTGKFRLHITALPLLAAHARHKIWIKPNGEMPFLYGNHVLKAHIGKM
SDDIPEHAGVIVYSMSDSPLGFGVSAKSSLEVRRLDPTGMVAFRQGDVGEYLREEDTLFA
*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG