YALI0E34199g

Overview

Description similar to uniprot|P47114 Saccharomyces cerevisiae YJR054W (ohnolog of YML047C) Uncharacterized vacuolar membrane protein
Locus type CDS
Locus tag YALI0E34199g

Location

Species Yarrowia lipolytica Positions 4063788..4065494
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1707 (nuc.)
Previous locus YALI0E34170g Next locus YALI0E34221g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E34199g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E34199gYALI0E34199g_mRNA-001YALI0E34199g_CDS-001

Nucleotide sequence

 

>YALI0E34199g
ATGTTCCCATTCTTCTGCTTTGAAAACCGGGAGAAATGGGCACGCCAAGTCGGCCAGTCG
TCGTTCGACCTGGTGGACATGACCCAGTTCCACAGCACTTCCTTCCGAATCATCATCTCG
TACATCTTCATGTATGTCCAGATCATCATCACTCTGGCAGTTTATGCCTCAGATATTTAC
ACAGCCATCATGTTGTTGGCGTTCGACCGCTGGGCCTCTTCCATCACCCCCTACGTGCCC
TTCCACATCTCCCGATGGCTGTTTGGAGGCTGCATTCTCTTCTCATTTGTGCTTCTCATC
TACGACTACATCCAGGCTTACCGTGTGTGGAAACGGTATAACATCTGTCTCACATACACA
AACCCCATCTGTCGAACAATCTACTCCATCAAAGGTTTCAACTACTTTTGTTTGTTTGCT
AAGATCACCAAGTCTAAGGAGTTCACCGACTACGTTGCCCTGTTTGTCTTCTTCACTTTC
AAGGGCTGGGCGAACCTCCTGTTAGCTGAGGGACCGAGACAGGTTCTAAATGCTCTCACT
CTGTATTCAGTGCTCAAAATTGACGACGACTTTGTGGGGGCTGTTACAGCTCTGGCTGAG
AAGTCACATATTGAGGCTGTCGTTGTATCCTTCATGGCATTCTCGCTGCTCATCTGGGTC
ATCTCCATGTTCATGTTCATTCTGGCAATGCTCTGTTCATGCTCTGTGTGGACCCAAGTA
AAACGACACAGGTGTCACTCGCTGGAAGAGTACTGCTGTGTCCGAATAGACAAACGAGTG
GCACACCTAGTTGCGAAGTACCACAAACGTGGCATGCAGAACCTGGCTCTGGAGAACTCG
AGAATGTCCAAACAACCCACACTGCCCACCATCGAGTTCCTGGGTACCGAAGAAGAAAAT
ATTGGTTACGGCCACTCCAATGCTCACCTGGAAGCTTATGGTGGCTCTAAAACCAACTTG
TTGGCAGCCGACCAGGTCGCTGAAGAGTTTTACAGTAATAAGGAGTACTCTCTGAGTGAT
CTACAGTCGTATGACTCTCGAAACACTCTCGCTGAGCCCTCAGACCCGCTTTCCAAGTCT
GAATTTAGCGACATCACGAGCATCAAACGAAGTGACACTGAGCAATCAAACTTGACAGTC
TCTGGATTCTCCAATGGTGTTCATAAAGTTCCCAGAAAGCCCACTCCAGTGAGACAGGCC
TCAGGATCTCTTTACCAAAACGACAGCAGCTCTACAAGCAGGCTTTATATCAGCGATAAC
AGCTCGAGCTTGTACCAGAATCCCAACATTAGCACCTCGGGAGGTTCCATCAGCACATTC
CTGGAGCCCGAGACTCAATCGTTCAGTTACAGTCCTCCCAGATATGATCCTTCCGAGTAC
AGAGGGGGTAGACAACCATCAGATGTTCGCGAGAGACCCGAACAGGCTTACTCAAGACGT
CCATCGCAACAGTCGTCTACAAGAAGACCTTCCGAGCCTTATGACAGAAGACCGTCTGAA
CAGTCTTACGACAGAAGACCATCTGAACGATCATACCAGAGACGCGCGTCTGGGGCACAG
GACAGTCATCTATCTTCTCGATCTCAATCACCGCATCTTCCGTTCCAACTCGACCATCAA
CCTCACAGCCAGTCTCAGAATCCCAACCTGGATCCCTTTGATCCCTCATATAAATAGACT
AAAATTGCATTTTCCTTATATACTTAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E34199g_CDS-001

Protein length: 559 aa.
Product: Vacuolar membrane protein, putative

>YALI0E34199g_CDS-001 MFPFFCFENREKWARQVGQSSFDLVDMTQFHSTSFRIIISYIFMYVQIIITLAVYASDIY
TAIMLLAFDRWASSITPYVPFHISRWLFGGCILFSFVLLIYDYIQAYRVWKRYNICLTYT
NPICRTIYSIKGFNYFCLFAKITKSKEFTDYVALFVFFTFKGWANLLLAEGPRQVLNALT
LYSVLKIDDDFVGAVTALAEKSHIEAVVVSFMAFSLLIWVISMFMFILAMLCSCSVWTQV
KRHRCHSLEEYCCVRIDKRVAHLVAKYHKRGMQNLALENSRMSKQPTLPTIEFLGTEEEN
IGYGHSNAHLEAYGGSKTNLLAADQVAEEFYSNKEYSLSDLQSYDSRNTLAEPSDPLSKS
EFSDITSIKRSDTEQSNLTVSGFSNGVHKVPRKPTPVRQASGSLYQNDSSSTSRLYISDN
SSSLYQNPNISTSGGSISTFLEPETQSFSYSPPRYDPSEYRGGRQPSDVRERPEQAYSRR
PSQQSSTRRPSEPYDRRPSEQSYDRRPSERSYQRRASGAQDSHLSSRSQSPHLPFQLDHQ
PHSQSQNPNLDPFDPSYK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG