YALI0E34170g

Overview

Description highly similar to uniprot|P47117 Saccharomyces cerevisiae YJR065C ARP3 Essential component of the Arp2/3 complex
Locus type CDS
Locus tag YALI0E34170g

Location

Species Yarrowia lipolytica Positions 4059323..4061249
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1927 (nuc.)
Previous locus YALI0E34155g Next locus YALI0E34199g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E34170g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E34170gYALI0E34170g_mRNA-001YALI0E34170g_CDS-001

Nucleotide sequence

 

>YALI0E34170g
ATGGCGCATCTGGGAACCCCTGCGGTTGTCATGGGTGAGTATCGCGTGACTGGATGGACA
CGGCAGGATTTTCAAGGGGACTCTACTAACTTCAGACAAGTGAGTAATTCAGTGGTTTAT
CTCCATTGAGACATTTTGGAGAGGTGATGAGGGTTATGCTGTGGGATGATGGTGATGATG
AACAGAATGAGAATGAGAGAAATGAGAAGGAACAAGAGAGTGCTGACAGACGATGATGGC
TGTTGTGGAATGTCATAACCAACTATGGTTCTTCAATCGATCTTTGGACACAGGCCGCAT
GTCGATATTGATACATCGACATCTACATCGACGAAGACACAACGACATAACGATACAGTC
AGAAACATACAGCAACGGAAGCGATCAGTGGCTACACTAAGATTATGTTATCATATCATC
AGAGAAAACATAACCCGTCATATTTGTTTCAAGTCCTCTTTGTATCATCTACGCAAACCC
GATACCCCACATTGATATGTGATTGTGTGGTGTGAAAGGCAACATCAACACCATAGCCTG
TCATTCATCCCAGCCCACCCACGACCAAACATATACTAACTACAGCGGTACCGGTTACAC
AAAACTCGGTTTTGCCGGTAACGATGCCCCCTCTTTCGTCTTCCCTACAGTGATTGCCAC
CGCCAAAGGATCTTCCGGCGGCAACATCAGTCGTAAGGGTACCGAAGACCTCGACTTTTA
CATTGGCGACGAGGCCCTCGCCGCCGCCAACGGCCCTGCCTACTCGGTCAACTATCCCAT
TCGACACGGTCAGATTGAAAACTGGGATCACATGGAGCGGTTCTGGGAGAACTCGATTTT
CAAATACTTGCGATGCGAGCCCGAAGATCATCATTTCCTGCTAACTGAGCCTCCTCTCAA
TCCCCCCGAGAACCGAGAAAACACCGCCGAGATCATGTTTGAGTCTTTCAACTGTGCCGG
TCTCTACATTGCCGTACAGGCTGTCCTGGCTCTGGCCGCATCTTGGACTTCCAACAAGGT
GACTGATCGATCTCTGACCGGAACCGTCATCGACTCCGGAGACGGTGTCACCCACGTGAT
CCCTGTCGCCGAGGGTTACGTTATCGGCTCGGCCATCAAGTCCATCCCCATTGCGGGCCG
AGACATCACCTACTTCATTCAGAACATGCTTCGAGACCGAAACGAGCCCGACACGTCGCT
CAAGACCGCAGAGCAGATCAAGGAGAACTACTGTTATGTGTGTCCGGACATTGTCAAGGA
GTTCAACCGATTCGACAACGACCCTGACCGATTCCAAAAGTACATGGCCGACCAGGGTCT
GCATCGACGAGCCACCGTGGATGTTGGATACGAGCGATTTTTGGCCCCTGAGATCTTCTT
CAATCCCGAAATTGCCTCGTCCGACTTCCTGACCCCTCTGTCCGAGGTGGTCGACACCGT
GGTCCAGTCCTCGCCCATTGATGTGCGACGAGGTCTCTACAAGAACATTGTTCTGTCTGG
AGGATCAACCATGTTCAAGGATTTCGGCCGACGTCTGCAGCGAGACATTCGAACTCTTGC
TGACGATCGACTTGCTGCTAACCAGCGGGCGACCGGAGTCAAGTCTTCGGGAGTCGATGT
GAAGGTCATCTCACACTCCAAGCAGCGAAACGCTGTATGGTATGGAGGATCTCTGCTGTC
TTCTACTCCCGAGTTCAAGAACTACTGCTACACCAAGCAGGATTACGACGAGATGGGACC
TGGTATTGTGCGAAACTTTTCTCTGTTTTCCATGGTCTAGGGATTGTATGTAGTGTACAT
TTATGATATAACGATTGATCCAGCCCAGTGTCATGATACACGAGGTGAGTTGGTAGAAAT
GTTGGGTGTACTATAGAAGGCTATGTGTACACTATGTTGATAATTAATTATAAGAATACT
GATGAAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E34170g_CDS-001

Protein length: 411 aa.
Product: Essential component of the Arp2/3 complex, putative

>YALI0E34170g_CDS-001 MAHLGTPAVVMDNGTGYTKLGFAGNDAPSFVFPTVIATAKGSSGGNISRKGTEDLDFYIG
DEALAAANGPAYSVNYPIRHGQIENWDHMERFWENSIFKYLRCEPEDHHFLLTEPPLNPP
ENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSNKVTDRSLTGTVIDSGDGVTHVIPV
AEGYVIGSAIKSIPIAGRDITYFIQNMLRDRNEPDTSLKTAEQIKENYCYVCPDIVKEFN
RFDNDPDRFQKYMADQGLHRRATVDVGYERFLAPEIFFNPEIASSDFLTPLSEVVDTVVQ
SSPIDVRRGLYKNIVLSGGSTMFKDFGRRLQRDIRTLADDRLAANQRATGVKSSGVDVKV
ISHSKQRNAVWYGGSLLSSTPEFKNYCYTKQDYDEMGPGIVRNFSLFSMV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG