YALI0E34001g

Overview

Description some similarities with uniprot|P38692 Saccharomyces cerevisiae YHR102w NRK1 ser/thr protein kinase that interacts with CDC31P
Locus type CDS
Locus tag YALI0E34001g

Location

Species Yarrowia lipolytica Positions 4039378..4042129
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 2752 (nuc.)
Previous locus YALI0E33979g Next locus YALI0E34037g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E34001g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E34001gYALI0E34001g_mRNA-001YALI0E34001g_CDS-001

Nucleotide sequence

 

>YALI0E34001g
ATGATAAACTCGCTTTACAGACTACTACAGAACATCGAGCTGTCCACGTCTCCTCCTCAA
CACTGGGATATGCAGACATCCACGCCCGTCACGTCCATCTACCAGCGCCAGGAGGTCATC
GGTCGCGGCAACTTTGGCGTGGTCTACAAGGGCTACCACAAAAAGACCAAGCAGCTGGTG
GCTATCAAGGTACTCAACCTAGACACGGCAGAGGACGACGTCAAGGAGGTCCAGCATGAG
ATTCAATTGCTGAGCCAGCTCAAGCTCGCCGACGCAGAAAACATCACCCGCTACCATGGC
TCGTATCTCCACGGCTCGCGTTTGTGGATCATCATGGAGTACTGTGCTGGAGGCAGTGTG
CGCACTCTCATGAAGGCAGGCCGTATCGAAGAACGACACCTCAGCGTCATCACACGTGAA
CTGCTCATCGCTATCCAGTACATGCACAAGGCTGGAATCATCCACAGAGACATCAAGGCC
GCCAACATTCTCATCACCCAACAGGGACGTGTTCAGCTGTGTGATTTCGGAGTGGCCGCG
CAATTAGTCTCCTCCAAGACTAAACGGTCCACTATTGTGGGAACACCCTATTGGATGGCT
CCGGAAGTTATCACAGAAGGAGCATCATACAACGTCAAGGCAGATATTTGGTCGCTTGGT
ATCACGCTCTATGAAATTGCAACAGGCTCCCCTCCCCTGTCCGACCAGGAGGCAATGAGG
GCCATTTTTCTGATCCCCAGAAACAAACCCGCAAGATTGGAAGGATCCCAGTACTCAGCG
GCCCTCAAGGAAATTGTCGCACTATGTCTGGACGAACTGCCTGACGAACGACCCTCAGCA
GAGGAGCTGTCAAAAACCAAGTTTGTCAGAGGCTCAAAGGGTATCCCAACATCGACCATC
AAAGACCTCATTTCAAGATATATGCACTGGAGGGAACACAACAAGTCACGTGATTCGATG
GCTGTATATAACCGGCATTCCATTGGGTCTGAAGAGGATATTGTGGACCATTCGGACGAC
TTTCGGTGGGACTTCGACACATCCACTGCGCCTGATGATGCTCGTGTGGAGGTTCATAAT
GGCCAGATGGACTTCAGGCCAGAACCCACACATGCCTACAGAGATATTGGCGAGATGGGT
ACCCAAGTCCTGTTGCAGAGCACTGTCTCTGCCTCTGAGGTCTTGGAACAGAGATATGAG
CAGCAGCAGGGACTACAACAAGGCCAACTACACGATCTTACGACAGCTACTAACACGATG
ACTGTGCCTCAGGAAGAAGAGGAGCCACATCCACTTCTGGAGCTGTTTGTGGACGAAAAC
GAACCTCCTGCCCCTCCTGCCCCTCCTGCCCCTCCTGCCCATGCTCCTATGCCTGCTCGT
CCCGAGCTGTCTTCCTCAATGTCTCTACCTACGGTTCCCACTCAAAAGACTCAAATGGCG
TCTATGGCTCCAACTCTCAACGATCTAAGAGAGGAAGGCGAGCCTCCAGGGGTACCTCCC
ATGGCCATGTCTCGCCGTAAGACTCTTGGACGGGGTTCCAAGATGGGAGCTTCTCCCGAG
AAAGATCATCCCCAACCTCCTCCTCTTCAGCATTCACACAGTTTCGCACAGACCCAAGGC
CAAGGTCAGAATCTCAATCAAACCACCCATTCAGGCCAGGCAATTCACCCCGGTCTAGGA
GGTTTGCCTCAAGTGCAGCAGCCGCCTCAGCTACAGCAACAACTTCCTCCTCAGATAAAA
CAGCCCCCTCATCAAATACAGCATCCACAGCCACCGCTGATGCCCCAATTGCATCAGACA
ATGCCTCCTGTGCCTCACACACAACCTCCTCCCTCTCAGATGCCGCCTCTCCCACAGCAG
CAGCCTCCACAACAGCCATTGGCTCCCCCACCTTTAATGGCACAGGCTCCGCCGCCCCCG
ACACCAATGCATCACTCCTCCGCGTCGCTGGCCGCGGTAGCAGCTGCGAAGTCAGCTATC
AATTCGGCCAACCCTTCTTCTGGGGCATCTCTGGCTGCCCCTCATCAGGTTTACCCCAAG
AGAACGCCCTCTCCCATTCGGGGCAGTCCTCCACCCGTGAAACGGCCTTCCAGCCCTCCT
CCGCAGTTCCACAGACCCTCTATCTCGTCGGTGTCGTCCATCTCATCAGCAGCAGCTTCT
CCCTCTGCAGCTTCGCCTGTGATGAGCCACAAGTCGTCTGTGTCTTCTGAAGACGGCGGC
CATGCTTCTCCTCCGTTGATACCTCGTTCCGAGAACCCCCAGCTGGCTACCCGGTCAGCT
TCTGTTCCTGACGTGGTTATGCCTCGCTCAGACGTTAATGGAAAGTCCCCTGCGTTCAAC
ACCGAGAAGCCCGCCAAACTGCGAAACGTCAACCTGCAGATCAAAATGCCTCCGGCACAA
GCCCCGCCCATGCCCGATGCATTCATGACCCCTGCCCGCAAAGAAGACTACACGCCCAGT
CTTAATGTTCCGTCTCAGCCTTCGTCGCGTCGTCCTTCTCGGGCTGCCCAAACCCAGCCG
CCCGTTCAATCCACTCTGCAGTTCCCTCCCATTCCCAAAATTGATCTGTCGGTGCTGCTG
GACCCTGCTCCTCACGCCGATGTCACTCGGGAGCTGGAGAAGCTGCTTACCTCTTTTGGA
GACGCTCTCAAGGTGATGGAGGACGGCTTCTCATCACTCTAAGCATTTACTCCCCCACGG
TATTAATTATATAGCCTGCTAACATTCATTAGATGATAAGTGAACGATTTAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E34001g_CDS-001

Protein length: 894 aa.
Product: Conserved hypothetical protein

>YALI0E34001g_CDS-001 MINSLYRLLQNIELSTSPPQHWDMQTSTPVTSIYQRQEVIGRGNFGVVYKGYHKKTKQLV
AIKVLNLDTAEDDVKEVQHEIQLLSQLKLADAENITRYHGSYLHGSRLWIIMEYCAGGSV
RTLMKAGRIEERHLSVITRELLIAIQYMHKAGIIHRDIKAANILITQQGRVQLCDFGVAA
QLVSSKTKRSTIVGTPYWMAPEVITEGASYNVKADIWSLGITLYEIATGSPPLSDQEAMR
AIFLIPRNKPARLEGSQYSAALKEIVALCLDELPDERPSAEELSKTKFVRGSKGIPTSTI
KDLISRYMHWREHNKSRDSMAVYNRHSIGSEEDIVDHSDDFRWDFDTSTAPDDARVEVHN
GQMDFRPEPTHAYRDIGEMGTQVLLQSTVSASEVLEQRYEQQQGLQQGQLHDLTTATNTM
TVPQEEEEPHPLLELFVDENEPPAPPAPPAPPAHAPMPARPELSSSMSLPTVPTQKTQMA
SMAPTLNDLREEGEPPGVPPMAMSRRKTLGRGSKMGASPEKDHPQPPPLQHSHSFAQTQG
QGQNLNQTTHSGQAIHPGLGGLPQVQQPPQLQQQLPPQIKQPPHQIQHPQPPLMPQLHQT
MPPVPHTQPPPSQMPPLPQQQPPQQPLAPPPLMAQAPPPPTPMHHSSASLAAVAAAKSAI
NSANPSSGASLAAPHQVYPKRTPSPIRGSPPPVKRPSSPPPQFHRPSISSVSSISSAAAS
PSAASPVMSHKSSVSSEDGGHASPPLIPRSENPQLATRSASVPDVVMPRSDVNGKSPAFN
TEKPAKLRNVNLQIKMPPAQAPPMPDAFMTPARKEDYTPSLNVPSQPSSRRPSRAAQTQP
PVQSTLQFPPIPKIDLSVLLDPAPHADVTRELEKLLTSFGDALKVMEDGFSSL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG