YALI0E33979g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0E33979g

Location

Species Yarrowia lipolytica Positions 4038185..4039080
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 896 (nuc.)
Previous locus YALI0E33957g Next locus YALI0E34001g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E33979g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E33979gYALI0E33979g_mRNA-001YALI0E33979g_CDS-001

Nucleotide sequence

 

>YALI0E33979g
ATGTCCTTTGGACGCCTGTTCCGACAGTCACGCATACCGGCGATGCACACGTCGGAGAAC
GTGTCACCACATGCGCCAACCACACAACTGGTCGGATCAATGCGGGGCAAAGGGAAGAAG
CTGGAGTATGGACTCAAGCACAGCCGGAACCCCAAACAGCCGAAAATGGTGTCTGTGGCC
GGCCAGGATTGGTTAGGACTCGGCACCGACTACCGACCCCAGGACATGGGCTTTGCACGC
GCCCAGGAGCAGTTTTCCACCGCCGGAATCGCCCTGGAAGGACCTCCCTTAATACAAACT
GCATCACAGTCCAACCTCAGTTACGCCTTCATCAAGTGGTGCAACGACCGAGGCGTCAAG
CGCAGCGCTCTGGACGGCGAGTATCTCATCCAGCTTGCCAAAGAGTACGCTGCAACACAA
AAATTCGGTCCGTGGGACTCAATATCCACGAAACCCGTGGCTGGACCGTCCTACTTCCCC
AAGGGATCGCTACACACATCTCGTAACGGAGTCATGGCAAATCCCATGTTACCAGCACGT
ATTGTGGATGATCAGCGCACAAAAGCTGCTTGCATCGGCGTTGTGGCTACCTGTGAAGTG
AACGACTCGTCTATCAAACACCACAGAGACAAGATTGTGATGATGGAGGTCCAGGGGGCC
AAGCTGGACAATGACAAGTTGATTATGAAGCTGCAATCGACGACGAAAAAGGCGAGTGCC
AACGTGTGGAAGGACTATACGGGATCTCAAAAGCTGCAAAGAATGCACGCGGATAGTAAC
AAACATTCGCAGCACAGAAAGTACGAAAAGCTGTTTGATTTGCTGCAGTGAACCAAACAG
CACAGACGAATGAGGGAATGTATATATGTATATAGAAATTGCATGGTTGTTATATC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E33979g_CDS-001

Protein length: 277 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0E33979g_CDS-001 MSFGRLFRQSRIPAMHTSENVSPHAPTTQLVGSMRGKGKKLEYGLKHSRNPKQPKMVSVA
GQDWLGLGTDYRPQDMGFARAQEQFSTAGIALEGPPLIQTASQSNLSYAFIKWCNDRGVK
RSALDGEYLIQLAKEYAATQKFGPWDSISTKPVAGPSYFPKGSLHTSRNGVMANPMLPAR
IVDDQRTKAACIGVVATCEVNDSSIKHHRDKIVMMEVQGAKLDNDKLIMKLQSTTKKASA
NVWKDYTGSQKLQRMHADSNKHSQHRKYEKLFDLLQ*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG