YALI0E33935g

Overview

Description weakly similar to uniprot|C4R5L1 Komagataella pastoris hypothetical protein
Locus type CDS
Locus tag YALI0E33935g

Location

Species Yarrowia lipolytica Positions 4034900..4036608
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1709 (nuc.)
Previous locus YALI0E33913g Next locus YALI0E33957g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E33935g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E33935gYALI0E33935g_mRNA-001YALI0E33935g_CDS-001

Nucleotide sequence

 

>YALI0E33935g
ATGAGAGGAAGTATAGTTAAGGCTGGCCCTATGGCCAGTAACGCCGTCCTCTCCCATATC
GACATGTCCACCCATCTTGTTGTTTGCACCCACGGCGTGTGGGGAACCCGCGCCCACTTC
AATTACATTGTGGAGCAGCTGCTGGAGACCAACTCCAAGACCATGGAGTTCTACCAGGAC
GACTCCACCTGCATCGAGGACTCGCTGGCTGAACTCAAGTCCCGCCAGGGAGACGTCGTG
GTCATCTATCGAACGCGAGGCAACGAGGGCTACTCCACCTACGACGGAATCGACGTCTGT
GGCGCCCGTCTGGCCGAGGAAGCCGAGACTCTCATTTCGCTGATTGAAAACAACTCCGAC
AGAAAGGTGGATCGTCTCTCAATGGCAGGCTACTCCCTGGGGGGTCTGATGTCGCGATAC
GCCGTTGGTCTGCTGTACACGCGTGGAGTGTTCAATCGAATTCCTCCTGCTTCTTTCACC
ACCTTTTGCACACCTCATGTTGGTGTTCGAGTGCTTGGAGAAAGCAGACTGGCCAGCGCC
TTCAACTCCCTCGCAGGATCGCTCATGGGCAAGACAGGTAAGCAATTGTTCCTGGAGGAC
CGAGTGCGAGTACGAGAAACCGCAATGACCGACTCCAACCGAGAACAATTCTCCAAGCCC
ATGCCCTTGCTGGAAATCATGTCCTACGCCGAATCGTCCTTCTCCAAGGGACTCGCAGCC
TTCCAGCACAGAAACCTGTACGCCAACGTGGTCAATGACTCGCGAACGGCGTGGTACACT
GCAGGAATCTACGATTTCGACCCCTTTAAGGGTGTCAACATGGAGTCTGTTACTCTGCCT
ACAGTGGAAGGCACCAATGAGATCATTGTCGATACCTCGCGTCTCAACAACATCAAGCTG
CAACAGTCGGACACCTCCAACCTCCTAGCTCCTCCGCCAGAGGCAATCAAACAGCCTCCC
GGATGGCTGGAACGCCGGTTCCGATGGGCAAAGGTCATCTACAACATTGCCGTCACCATG
CCCATGTACGCCGTCACTTGGATTGCGTCTGCCATCTTCTACGGCATCATTTCCAACCGG
CGTCGAGTGCAATACGCCAAGGGCGAGTACTGGAAGAACAATACTTCTGATGACTTTGTT
GGAGCTCTCTTCAACGGCAAGGTGCACTCTCCTGGCGACAAGTCATCCGAGTCTTCTTCT
TCTTCTTCTTCTTCTCAGTCGCACGGACACCACAGATCACATTCCCTGGAGGAAGGTGCG
TTCCGTACGGCCTTGGAGGATCAGGTGGACAAGACGATGGACTCCATGTTCACTGCCATG
GAGTACAAGACCACGGAGGGGGACACGTTGGATCTGACCAAGACCAAGTTGGTGCTATCG
GACAGCCAAAAGACCATCATTGAGAACCTCAGTAAGCTCAAGTGGGATAAGACCGCCATC
CACATCCGTGCCACCAAACAGGCCCATGCTGGTGCCATTGTGCGTCATCCAGACCCGTCC
TTCTATGAAGGTAAGACCGTTGTCAAGCACTGGATTGACAACAAGGCCCGTCTTTGAGAG
CAGCCTGACTCGGCCTTTGTAGAGCAAGGCCATTATTGATTTATAGACATTATACCGGGA
AATACTAAACACAAGAACCTTCGGCGTGATTATCTGCACTTGTACCACGCTGCAGTAAGT
TAGTAATCGGAATTCAACTGCCATTAGAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E33935g_CDS-001

Protein length: 519 aa.
Product: Conserved hypothetical protein

>YALI0E33935g_CDS-001 MRGSIVKAGPMASNAVLSHIDMSTHLVVCTHGVWGTRAHFNYIVEQLLETNSKTMEFYQD
DSTCIEDSLAELKSRQGDVVVIYRTRGNEGYSTYDGIDVCGARLAEEAETLISLIENNSD
RKVDRLSMAGYSLGGLMSRYAVGLLYTRGVFNRIPPASFTTFCTPHVGVRVLGESRLASA
FNSLAGSLMGKTGKQLFLEDRVRVRETAMTDSNREQFSKPMPLLEIMSYAESSFSKGLAA
FQHRNLYANVVNDSRTAWYTAGIYDFDPFKGVNMESVTLPTVEGTNEIIVDTSRLNNIKL
QQSDTSNLLAPPPEAIKQPPGWLERRFRWAKVIYNIAVTMPMYAVTWIASAIFYGIISNR
RRVQYAKGEYWKNNTSDDFVGALFNGKVHSPGDKSSESSSSSSSSQSHGHHRSHSLEEGA
FRTALEDQVDKTMDSMFTAMEYKTTEGDTLDLTKTKLVLSDSQKTIIENLSKLKWDKTAI
HIRATKQAHAGAIVRHPDPSFYEGKTVVKHWIDNKARL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG