YALI0E33913g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0E33913g

Location

Species Yarrowia lipolytica Positions 4031854..4033659
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1806 (nuc.)
Previous locus YALI0E33891g Next locus YALI0E33935g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E33913g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E33913gYALI0E33913g_mRNA-001YALI0E33913g_CDS-001

Nucleotide sequence

 

>YALI0E33913g
ATGACTTCCCTAGATTTTGCATTCCCCCCGCGGCTCGACCACAGCTTTCCCGCATCTCCT
CGACAGATGCCGGCCATCACGATAGAACGAGGCGACTCAGGCACCACTTCACAGTCCTCC
GAGTCGTCTGAGGCCTCTGCTGCATCCACCACCTCGACCATGGCATCCTCGCTAGGCGCA
GACGTGTCTTCGCGCACCGCATCGCCCCGCAAACACGCCCATCGTCGATCAGCAGCCGTG
TCCTGTGACTTCGACGCCCAGGTGCTTTTCAACAAGCATGATTACTTACCCCCCAACCCG
CATAAGCAGAACATTAGCACCAGCACCACCACTCTGGCGCCTCCTCAGCCCGTCTCTATT
CCTGCGGCTTCACAGTCGCCTAAACGAGACGTGGCATTTATTGATCCTCCCCGAGTGCTC
GGTTCTCCCCCCCGAATGGCGTCTCCTTCTGTGTCGGAACAGTCGTCTTCGTCACAGCTG
TCGACGTCGCAGATTTCGTCGCGATCCGCCTCGCCGTCGAAATCTTCGTCACCCAAAAAG
AACCGACACAAAAAGGTGCGATCCTGGGCCGGCTCGCTCATCAAGTTCCGGTCCTCATCG
TCCCTCAGAAAGGGAAAGAGCCCCATGAACAATACCCCAGGCAACGGCAACGGCAACGGC
AACAACACCAACAGTATGACGGATGAAAACACGACTCTTTCTTCACCCACCCTGTCGTCC
CCCACACTGCACTCGTCGTCGTACATTGCCACCAACGACCCTTTCTACTGCCCCGGTGCT
GGCTCACCGGAGGTGTCCCCCTCTCCCTCTTCCAAGGAGTTTGAGACCATCGATCTCGAT
GCCGCCCTCTACCCCCTAACGCTGCCTCCTTCTACTACAAGCCGGTTCCACCGTCGGTCC
GAGTCCGCCCCGGAGGCCATGCTGGACCCCACCCGTGGCATGAAGCGCAAGATCCGAGCC
CTGGTTGGCGAGGACCTGTTGTCGCTCAATGGGTCGTCCGCTGATGATGCAATTATCGAG
GAAGAGGAGCCCTCTAGCGCTGAGGCTCTGGGTGAGCCTTCTGAGCTCTCTGAGCCCGTC
CTCACCCCCGCATCATCCACGTGTTCGCAGCTGGTTTCTGCGAATGCCTCCGCCTCTTCT
CTGGTGTCTGTCTCGTCGTCCTCTACCCGATCACGCTCTCGAACCCGGTTCCATAGATCC
TACAACAATGATCTGGCCCAGGCTATGAAGGACCGCAAGGAGCGAGACGAGCGGGACAAG
CGAGAGAAGCAGGAGGCTGAGCTCCAGGCCCAGACTCCCGGAAAATCATTTGAGTCTACG
TTTGCTGCTACTACCCCAGCCGGCTCGGGTTCTATGCACGCGACTCCCACTGCTCCTACT
GGTGCCTGTTCCTCTCTGCAGTCTCCTCTTCGAACCGTCCGAAAGATGGATGCTCCCCGA
CTTCTCGGCTCTCCTTCTCGTATGGTGTCTCAGGACTTGCCCCGGTATACCTACGAGGAG
GAGCCGCGGTTCTCTACACATTACTCATTCACATCCGAGTGGAACGATGATTTCGGAGAG
CCCGGCCCCGTGGAGCATGCGGACGTGAGTGCTGTGAGCAGCCGGACGTCCGATATCAGT
GAGGTGCATTCGGACCGAAACAGCGTGTCTCGATACCAATCCCACCATCAACAGCACGGT
CACCACCAGCACAGCCACCACCAGCACAGCCCTTCGTCCCACAAAAATGTCGCCGCGCGA
ATGTGGGGCTGGGTCAAGAGAAAGTAATTTATATAGCATTGCATTATTATTATTATATTG
GCATAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E33913g_CDS-001

Protein length: 589 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0E33913g_CDS-001 MTSLDFAFPPRLDHSFPASPRQMPAITIERGDSGTTSQSSESSEASAASTTSTMASSLGA
DVSSRTASPRKHAHRRSAAVSCDFDAQVLFNKHDYLPPNPHKQNISTSTTTLAPPQPVSI
PAASQSPKRDVAFIDPPRVLGSPPRMASPSVSEQSSSSQLSTSQISSRSASPSKSSSPKK
NRHKKVRSWAGSLIKFRSSSSLRKGKSPMNNTPGNGNGNGNNTNSMTDENTTLSSPTLSS
PTLHSSSYIATNDPFYCPGAGSPEVSPSPSSKEFETIDLDAALYPLTLPPSTTSRFHRRS
ESAPEAMLDPTRGMKRKIRALVGEDLLSLNGSSADDAIIEEEEPSSAEALGEPSELSEPV
LTPASSTCSQLVSANASASSLVSVSSSSTRSRSRTRFHRSYNNDLAQAMKDRKERDERDK
REKQEAELQAQTPGKSFESTFAATTPAGSGSMHATPTAPTGACSSLQSPLRTVRKMDAPR
LLGSPSRMVSQDLPRYTYEEEPRFSTHYSFTSEWNDDFGEPGPVEHADVSAVSSRTSDIS
EVHSDRNSVSRYQSHHQQHGHHQHSHHQHSPSSHKNVAARMWGWVKRK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG