YALI0E33774g

Overview

Description similar to uniprot|P22219 Saccharomyces cerevisiae YBR097w VPS15 ser/thr protein kinase
Locus type CDS
Locus tag YALI0E33774g

Location

Species Yarrowia lipolytica Positions 4010387..4014450
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 4064 (nuc.)
Previous locus YALI0E33759g Next locus YALI0E33803g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E33774g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E33774gYALI0E33774g_mRNA-001YALI0E33774g_CDS-001

Nucleotide sequence

 

>YALI0E33774g
ATGGGAGCACAGATATCGTTGGTATCGACGTCTGCTGCCACAGTCAGTATCGAGGCCTAT
GTGGCAGAGCTCAACGACATTCTCTATGAAAAGAAGCTTGGCAACTCTCGGTTTCTCAAG
ACCATCCAAGGCTCGAGGATAGACAGCAATGAGAGCGTGATTGTCAAGGTATTCATTAAG
CCCAGTCCACGGGTGGATCTGAGCAGCTACGGAAAGCAGCTTGAAAGTGAGTATATCGTA
TTGTGGCGATTGAATGGTTGACCGCCGTTACTAACTCAGACCAACGGAAGCTATTGGCAG
ATGTGCCCAATGCAGCACCTTACCAGCGACTATTGGAGACGGAGCGAGCAGGATATCTGG
TGAGGCAGAATTTTAAGACCAATCTTTACGACCGAATCAGCACCCGACCGTTTCTGGATC
TCACCGAGAAGAAGTGGATTGCATTTCAACTGCTCAAGGGCCTAGAGCAGTGTCACGCCC
GAGGCGTGTTCCATGGTGACATCAAGAGTGAAAACACGCTTGTGACGTCGTGGAACTGGG
CTTTGTTATCGGATTTTGCACCCTTTAAGCCAGTTAGCTTGCCGTCAGACGACCCTTCGT
TCTTCTCCTTTTTCTTCGACACCTCATTACGGCGAACATGTTATCTTGCGCCTGAGCGCT
TCGCAGACGTCAATTCTTCCAGTCCCCAGAGCGCGCCCCAGGAGATGGAGCTTACCGGAG
CTCATGATGTGTTCAGTTTGGGATGCGTGATTGCAGAGCTGTTCTGTGAAGGTACCCCTA
TTTTCTCCCTGTCACAACTCTACAAGTATCGCCAAGGCGAGTACGAGCCGCAGCTGGATG
GAATCGAGGACGAAGGAACACGGGATATGGTACGAAGCATGATATCTCTCAAGCCTGAAG
ACCGGCTTAGTGCATCTGAATATCTGAACCAGTTCAAGGGATCTGCATTTCCTCCAGAGT
TCTACGACTTTGTGTACGACTTCATTTCGTCATTGACGTACATGAAGGGCCCCACGGCGT
GCGACGACCGAATTGAAAGCATTCACCTCAACTTCAAAATGACACCCGAGTGGGGTGTGC
CAAAGAAGTCGGACTTGGCATTTGCTCTGCCACCCACAGAGGAGAGCGTCACAATCAACC
TACCAGGTGTCAAGGATTGGGTTATCAGAGACCTTCAGCACGAAGCAGATGAACTTCCCT
TAATTTATTTATCGGTCATTTTCACGGCCCTTAAACACACTACCTCCTCCATCAGTCGAA
TAAAGGCCTGTGACCTCATTCTCATGTTCTCGCAATTTGTCAACGATGAGGTTCGACTCG
ACAGAACTTTACCTTATCTGGTTTCTCTTCTCAACGACTCAGTGGCTGTTGTTCAGGTAG
CTGCCATCCGCAGTGTGGCTCATCTCATGAAAATGGTCCAAGCTATCACTCCTTTGAACA
AGACTGTCTTCTCCGAGTACCTGGTACCTAGATTATTGCCACTAATCAATTCTAATGAGG
TGATTGTAAGAGAAGCTCTGGCTCTTTATCTCCCCTTGTTTGCCAAGACTGCTGGCCGTC
TGGCTAACATGACTACAACCATAAACGGCAACAAGACACAGAACGTTAATACTGAGAGGG
AGGAGTTGGTGGAGTCTTTTGAAGACTGTGCGGTTGGACTGATCACAGACACAGAGCCAG
TCGTCAAGGTAGCACTACTGAAGAACATCCTGGACCTTGCTGTTTTCTTTGGCAAGCGAA
GAACCAATGATGTGCTTCTCAGTCATCTCATCACATATCTCAATGACCGAAATTACGCCT
TGAGATTGGCATTTTTCGATGCCATGCTAGAATTGGCTCCTTTTATCGGTGCAGTGTCGT
TGGAGCGATACATACTCCCACTCATGATTCAGACTCTCGCTGACAGCGAAGAGGCCGTTG
TGCATAAGATCATGAGCGTGTTGTGTGTGTTCGCCGAGCTGGGGCTAATTCGAAAGGCAG
TCATTTGGGAGACTACTGGAATTGCTCTCAAGCTCACTCTGAGTCCCAACAACTGGATCC
GGTTGGCTGCCTTCAAGTTTGTCCATGTCTGTTCGCTGTGGCTGAACACTGCTGAGAAGT
TCTGTCTCTTGTTTCCCGCTGTTCGTCCATACCTGGCAAACGATGTGACAGATTTCGATC
TTGAGACTCTGTACTTCAATTCCAAGAAGCCGCTCAGCCGAGCAGTGTTTTCTCTGGCTA
TCACGTGGGCTGGAAAGAAGAGCTCCAACTCACTTTTCTGGGATATGGATTCAAAACCCA
CGCCCCATGAGTCCCTTGCTCAAAGTCTTGTTCTTTCTCAACTTCCCGGTCAAATGAGCA
ACTTTGCTGTGAGCACTGTCAAGATGGACGCCAGCAACATGACGTACGACTCTATTCCTC
GGTCCCCAGAAGACGATATCTGGATTGGAAAACTGCAAAATATTGGTTTCGATACAGCAG
ATCTCTGGAAGCTTGCAACCATGAGACCATACATCTTGCAATTGGCAGGTCAGATTGCAC
AAACCAGGGAGGAGAACGACGCTGGAGCTCTGGATCTCGATGGAGTTCCACTTAACAACA
TCTTCTTGAAAGAGGGCGTGACCTTCCCTGATGAAACCAAACCTGCCACATTCTCCAGTT
ATGACGGCAAGGACGTCTATGTTCAGCAGATGCTTCACCAAGCTTACCTGGAAGCCTCCG
AGTCTATCAGAGAGAACCCCGAGGGCGCTGTTGAGACTCAGACTATGAACTCGAAGCGAT
GGAAGCCTACTGGTACACTGGTCGCCATCTCCAACGAACACACGGCTCAGATTAACCGAA
TAGTCGTTAGCCACAATCAGCAGGTGTTTGCTACTGGCTCTGACGACGGCACTGTCAGGA
TATGGGAGAGTGACAAGCTCGAGAAGAACGTAATCTTCAAGAGCTGTCTTACTATTGACC
TCCAATCAAAGGTCAAGGCACTTGCATTCGCCACAACCAATATCCTTGTTGCAGCCACCG
AGTCCTCAAAGTTGGTGTTAATCAAACTTGTATTCGAAAAGGAGAGATGCAAGCGATACG
AGATCATGTATACCCACAAGCTCCCTAGTGGCTACTGCACCTGGCTGGAGCTGCATAGAC
AAACCATGGTCATGTGCACTACCAGAGGCCGTGTTGAGGCTCTGGATATCAGAGGTATCG
AGGAAGGCTCTGTATCTCTTACCTTGCTTTATTCTCTCGAGAACCCCCCTCACTACGGTG
TCCCCACAACCTTTGCAGTTGATAAGAGAGGCAATTGGCTTGTTGTTGGAACGTCTCGAG
GTATTCTTACTCTCTGGGACCTTCGATTCCAGTTGCTGGTCAAGTCTTGGGGCATTCCAG
GTCGAAAGACCATACATCGTATCTGTCTGCAACCCAGAGGTCGTGGAAAGCGCATCTTCG
TCTCTGGCGGCTCTTCTGGCGGTTTGGTGACCGTATGGGATATCGAACGAGGCACCTGCA
GCGAGATTTATCAACCATACAACTCCACCGTCGACACCATGAACTTCGAGCCTGTCCAGG
TAGACAGTGAAGAGTTCCAGAGCTTCTATGGTGAGGCTGTAGCCGATGAAGGTATTCTAG
AGGAGGATATTCAAGACGGAGAGGACTCCAAGTCGCTAATTGCCACTTCTCTCACTCTCA
CTGACGATGGCAAGTATGCTTACTTTGTCTATTCAACCTCCGACAGAATTGTCCGTCTCT
GCGACATAAGCTCGCCTGAGAACTCGTGCGTTGTGTGTGGACTAGACGAGGATGGCTGCC
GAGTGCAATACTCGCGGTTCCAGTCTCATCCCAAGATGGTTACTATCAGTGAGAAGCTAG
TGTCTCCCGTGGTGAACAAGAAACGCGTTGGAAAACCCTCTCGATTCTCCATCATTTCTG
CTGAGCAACAACGGAGCTTCAAGAACCACCAGGATCTTATCACCGACACAGCTATTCTTT
TGCGACCATACGAGATGATCCTGTCTGTGGATCGAAGTGGTTACCTCAGGGTCTTCTCCT
AACCTCATAATTTCCTATATATTAATGCATTTTTCTATTAGTAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E33774g_CDS-001

Protein length: 1323 aa.
Product: Serine/threonine protein kinase involved in vacuolar protein sorting, putative

>YALI0E33774g_CDS-001 MGAQISLVSTSAATVSIEAYVAELNDILYEKKLGNSRFLKTIQGSRIDSNESVIVKVFIK
PSPRVDLSSYGKQLENQRKLLADVPNAAPYQRLLETERAGYLVRQNFKTNLYDRISTRPF
LDLTEKKWIAFQLLKGLEQCHARGVFHGDIKSENTLVTSWNWALLSDFAPFKPVSLPSDD
PSFFSFFFDTSLRRTCYLAPERFADVNSSSPQSAPQEMELTGAHDVFSLGCVIAELFCEG
TPIFSLSQLYKYRQGEYEPQLDGIEDEGTRDMVRSMISLKPEDRLSASEYLNQFKGSAFP
PEFYDFVYDFISSLTYMKGPTACDDRIESIHLNFKMTPEWGVPKKSDLAFALPPTEESVT
INLPGVKDWVIRDLQHEADELPLIYLSVIFTALKHTTSSISRIKACDLILMFSQFVNDEV
RLDRTLPYLVSLLNDSVAVVQVAAIRSVAHLMKMVQAITPLNKTVFSEYLVPRLLPLINS
NEVIVREALALYLPLFAKTAGRLANMTTTINGNKTQNVNTEREELVESFEDCAVGLITDT
EPVVKVALLKNILDLAVFFGKRRTNDVLLSHLITYLNDRNYALRLAFFDAMLELAPFIGA
VSLERYILPLMIQTLADSEEAVVHKIMSVLCVFAELGLIRKAVIWETTGIALKLTLSPNN
WIRLAAFKFVHVCSLWLNTAEKFCLLFPAVRPYLANDVTDFDLETLYFNSKKPLSRAVFS
LAITWAGKKSSNSLFWDMDSKPTPHESLAQSLVLSQLPGQMSNFAVSTVKMDASNMTYDS
IPRSPEDDIWIGKLQNIGFDTADLWKLATMRPYILQLAGQIAQTREENDAGALDLDGVPL
NNIFLKEGVTFPDETKPATFSSYDGKDVYVQQMLHQAYLEASESIRENPEGAVETQTMNS
KRWKPTGTLVAISNEHTAQINRIVVSHNQQVFATGSDDGTVRIWESDKLEKNVIFKSCLT
IDLQSKVKALAFATTNILVAATESSKLVLIKLVFEKERCKRYEIMYTHKLPSGYCTWLEL
HRQTMVMCTTRGRVEALDIRGIEEGSVSLTLLYSLENPPHYGVPTTFAVDKRGNWLVVGT
SRGILTLWDLRFQLLVKSWGIPGRKTIHRICLQPRGRGKRIFVSGGSSGGLVTVWDIERG
TCSEIYQPYNSTVDTMNFEPVQVDSEEFQSFYGEAVADEGILEEDIQDGEDSKSLIATSL
TLTDDGKYAYFVYSTSDRIVRLCDISSPENSCVVCGLDEDGCRVQYSRFQSHPKMVTISE
KLVSPVVNKKRVGKPSRFSIISAEQQRSFKNHQDLITDTAILLRPYEMILSVDRSGYLRV
FS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG