YALI0E33759g

Overview

Description weakly similar to uniprot|P32855 Saccharomyces cerevisiae YPR055w SEC8 protein transport protein
Locus type CDS
Locus tag YALI0E33759g

Location

Species Yarrowia lipolytica Positions 4006470..4009799
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 3330 (nuc.)
Previous locus YALI0E33737g Next locus YALI0E33774g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E33759g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E33759gYALI0E33759g_mRNA-001YALI0E33759g_CDS-001

Nucleotide sequence

 

>YALI0E33759g
ATGAGCTACCTGGGTCTGCCCGACAACCACCGCACGACCAGACGACTGTCTGTGGCTCCT
CGAGACCACTCGGACCATGCGCCGTCACCCGTGACACGTAAGATCGATGAGCTGTGTCGA
AAGGTGGACTACGAGTGGCCCGAGCTGGGTCGAGACAATGCCAACATCCTCGAGGTGTCG
CTTTCGTTGATGGACACGTCTTCAATTGGAAAGGCCCGTTTCTCCAAGGACTACGAAAAA
CTCACCTCGGACATCAGCAACGTGCTCAAGGACGTGGTGAACGATAACTATCAGGGGTTC
AACTCCTCGGTAGGCTCCTACAGATCTATCGCGCAGAGCATCGCCGAGTCGCATGACAAT
GTGCGGCAGCTCAAACAGCAGCTAGTGGAGAGCAAAAGTGCGCTGTCCCGAAACAAGCCC
ATTCTCAAGGAGTTGGGCGCTACGTCACAGCGATACAAGCAGATGATTCAGATTCTGGAA
AAGATCAAGGATCTCAAGGCTGTTCCCGACAAGCTCGACACAGAAATCTCCAAGAAGCAG
TTTCTCTCGGCACAAGAAACCCTCCACAGCGCCCTCAGATTCCTCGATGACGACGGACTA
GCGTCAATCTCCTCATTGGAGGGTCTCAAAACCTACCTTCTTGCCCAGGAGTCGACCATC
TTTGCACACCTCGTCGAGGAGCTGCATTCTCATCTGTATCTCAAATCTCCCTACTGCGAC
CGACGATGGGTGGGCAACATTTCAAACCTCAGTTCACAATCTCTGACAGGAGCAAGATCC
GTTGGCGATATCGAACAGGTCATCATGGACAAGTTGGATCACGAAATCAGCAAGGGTGGA
AAGGCAACCATGACTTTCTCTGGCTCCGAGGAACTGCGTGACTTCCTGTCTGACCTGGCA
GAACACAAAGACCAACCTTTTGAAGAGAGCACAACTTCTCAGATGGCTAACCCCGAGCAA
AACTCGTTCATCTACATCCAACTGATTCTCGAGACAGTCAATAACCTCAATCGTCTTCCG
TCACTGTTTGAAATTGTTGACCAACGTCTGCCTATCGAGATCCACAAGCTCGTCGACAAG
ACAGTGCAGGAAGTTGCCGCGCGATTCCCCAAATCGTTACGTGACTTGCAAGAGTATGGC
GGTGACAACACGGAGGAGCGAGGCAACTCCAACAACCCTTCTGCCACAGGCTACCTGTCT
GACTTCTTTGGCCCTATCAATGGTGATATCGGGCTGAATGTGCTCAAGGACCTGGTCTGG
ACGCTGTATTCTAAGCTCTCCGCATGCCTTGAGGGTCACCGTGCATTCTACGAGGTGTCC
AAGGCCATTACTAACAGACACGATGGACACAAAAAGACTCTGGAGTACAATTTTCTCGGA
GTGTGGCAGACTATGGAATCCGAGGTCAAGATGCTACTCCGATCTTACATCACAGATGCA
TCCAACATCTCCGCACCAAACAGATTGGACTTTGACATTCCGGCGCCATTTAGACCCATG
ACCAAGCGAAGCAGTAGCACTCGAAAGCCCCTGTTCAAGCTTGATAACCCCGGAGGAATC
CCTGATGAGTTCAATCAGGAGAATGATATTCTGAGAGGCGTCCTGGAACACTCTGTGCCT
GGTTTGGCATCTGCATCTGGCAATGCCCTGCATTCTACATCTCGAAATGCAGGCTCTCCA
TTCGTCACTGTGGACACTGCTCTCAGTCACGAGATGCTCACTCCACCCAACGTCTTCAAC
GTTCGTGCTTTCCTTGATCCCACTCTTCTTTTCATGCAGAAAGTGCAGAACATCTTCCCC
GACCCCAAGGTCACTGGAATCAGCCATCCTCGACAGTTTCTGGACGAGTTCCTCAGCTCA
GTGTTCCTGCCTCAACTCGAGGACTCGTTGGAGAACGCCTTTTCAGCCACTGTGGAGTCG
AACGAGGCTTTCCAGATCACGGATGGCCTCTCTTCGAAGCTGGCTGCCCCCATTTTCAAG
TCGGCTGAGGCATTCTCTACGTTGGTCTTCCAGCTCTGTCGACTTCTCAACACCTCTTCT
CTGTACCGTGAGAAGTATACGTCGTTAATCCTGTCCCTGATCTCCAAGTTTGTCGCAAGA
TACAAAATCTACTTCCAGACCCTAATCTCATGGGCTGACTCCGATAAGGACCAGAGCAAG
ATCCGTCTATGTGCCAGATGGGCGGAAGAGCCCAAGCTGCGAACCATTTCCACTGAGATT
GTTCGAAATTCGCTCGACACTAATCAGCTCATCGACGAGGAGACCACCATACTGCTCAAA
TTGCAGGGCGGACTCCGAAAGATCCAGATCCCTATCACTAAACAGGACACTCTGGATCCC
AAGTCCTTCCGTGCAATGTGCACCCTGGTGTCTTCCCTGGAATGGTCTCTTGAGCAGCTC
GAGTCTCTACGAAACGTCGTCACCGAAACTCCCCCTACTTCTGCTTCTGGCGACTCTATG
GCTGCTTCTGGTGAGCTTCGAAAGCGATGGACCCTTACAGATGCATCAAAGCTTGTATCT
TCGTCCAGCGAGTCTGTTTCTGGACTCGTCAAGCTCACTTTGGCTGGTCAGGCAGTTGAC
GAGTTCGACAGGACGATGAAGGAGTACAAGTCTCTCTCATCTCAGTGTCTTGTCACTCTC
CGGTGTGACATTCGTGTCCGAGTCATGCACTACATTGAGCAGGCTATGATCAACGGAGAC
TACTACCTAGACCATCCACTTGATGAGCGAGACACGTTTGTCAGCCAATTGGATGCTGAC
ATTCTGCAGTGCGACGAGTGCATGTCTGGTCTTCTTAACCCTAACTTCAGACACGCGGTT
CTCAAGGGAGTGTCCAAGTACATTGACAATGTCTTTGTGGCGTCCACTCAGTCCCTGCAT
GCTCTCAACGCCAATGGTGTGGCTAAGCTGCTCTACAACATCCACATTATCCAGCAGATG
CTCAAGTCCATCATGGAGTCTCCACAGCAGATCACGTTCTCGTCGTCTCTCAAATACTAT
GAGCTGTTTGATCTCGATGCAGACACCATTCTGGCCGAGGTGAAGGAAGGAAAGTTGAAA
CAGTTCTCTACCGAGGATCTGCGAACGCTCATCAAGCTCAAGTTTAACGATGTCATTCAT
CAGCACGAGCGGCTTGACCGGCACGAGGCTGTTTCTTCGGCTCGAACACAGCTTCAGTCT
GCTCTGACCAAGCTGAACGAAACCAAGTTCAACGACGCCAAGAAACAGGCTGTTCCTTCT
CTTCCCCCTCGACAAGAGCCCTCTGCATGATGCTAATACGAGACAATTTGTATATGTAAC
GAATAATGATATTATAGATCTGATGGCATG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E33759g_CDS-001

Protein length: 1090 aa.
Product: Conserved hypothetical protein

>YALI0E33759g_CDS-001 MSYLGLPDNHRTTRRLSVAPRDHSDHAPSPVTRKIDELCRKVDYEWPELGRDNANILEVS
LSLMDTSSIGKARFSKDYEKLTSDISNVLKDVVNDNYQGFNSSVGSYRSIAQSIAESHDN
VRQLKQQLVESKSALSRNKPILKELGATSQRYKQMIQILEKIKDLKAVPDKLDTEISKKQ
FLSAQETLHSALRFLDDDGLASISSLEGLKTYLLAQESTIFAHLVEELHSHLYLKSPYCD
RRWVGNISNLSSQSLTGARSVGDIEQVIMDKLDHEISKGGKATMTFSGSEELRDFLSDLA
EHKDQPFEESTTSQMANPEQNSFIYIQLILETVNNLNRLPSLFEIVDQRLPIEIHKLVDK
TVQEVAARFPKSLRDLQEYGGDNTEERGNSNNPSATGYLSDFFGPINGDIGLNVLKDLVW
TLYSKLSACLEGHRAFYEVSKAITNRHDGHKKTLEYNFLGVWQTMESEVKMLLRSYITDA
SNISAPNRLDFDIPAPFRPMTKRSSSTRKPLFKLDNPGGIPDEFNQENDILRGVLEHSVP
GLASASGNALHSTSRNAGSPFVTVDTALSHEMLTPPNVFNVRAFLDPTLLFMQKVQNIFP
DPKVTGISHPRQFLDEFLSSVFLPQLEDSLENAFSATVESNEAFQITDGLSSKLAAPIFK
SAEAFSTLVFQLCRLLNTSSLYREKYTSLILSLISKFVARYKIYFQTLISWADSDKDQSK
IRLCARWAEEPKLRTISTEIVRNSLDTNQLIDEETTILLKLQGGLRKIQIPITKQDTLDP
KSFRAMCTLVSSLEWSLEQLESLRNVVTETPPTSASGDSMAASGELRKRWTLTDASKLVS
SSSESVSGLVKLTLAGQAVDEFDRTMKEYKSLSSQCLVTLRCDIRVRVMHYIEQAMINGD
YYLDHPLDERDTFVSQLDADILQCDECMSGLLNPNFRHAVLKGVSKYIDNVFVASTQSLH
ALNANGVAKLLYNIHIIQQMLKSIMESPQQITFSSSLKYYELFDLDADTILAEVKEGKLK
QFSTEDLRTLIKLKFNDVIHQHERLDRHEAVSSARTQLQSALTKLNETKFNDAKKQAVPS
LPPRQEPSA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG