YALI0E33649g

Overview

Description highly similar to uniprot|P39958 Saccharomyces cerevisiae YER136w GDI1 GDP dissociation inhibitor
Locus type CDS
Locus tag YALI0E33649g

Location

Species Yarrowia lipolytica Positions 3996859..3998257
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1399 (nuc.)
Previous locus YALI0E33627g Next locus YALI0E33671g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E33649g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E33649gYALI0E33649g_mRNA-001YALI0E33649g_CDS-001

Nucleotide sequence

 

>YALI0E33649g
ATGGACGAAAAATACGACGTCATTGTGCTCGGCACGGGCCTTACCGAGTGCATTCTCTCC
GGTATCCTATCCGTCGAGGGCAAGAAGGTGTTGCACATTGACCGGCAGGACCACTACGGT
GGAGAGTCTGCTTCTCTCAACCTTACCCAGCTCTACAAGAAGTTCAGACCTGGCAAGGAG
GACACCAAGCCCGACGGACTGGGCCGAGACCGAGACTGGAACGTGGATCTGATCCCTAAA
TTCCTCATGGCCAATGGAGAGCTTTCCAACATTCTGGTGCACACCAACGTGACCCGATAC
ATCGACTTTAAGCAGATTTCCGGCTCCTTCGTTTTCCGATCTGGAAAGATCGCCAAGGTG
CCCTCCAACCGATCGGAGGCCATTAACTCTTCTCTCATGGGTATGTTTGAGAAGCGACGA
CTTGCCAAGTTCCTCGAGTTCGTCGGAGGCTACAAGGAGGACGATCTCGCCACCCACCAG
GGCCTCAAGCTCGACACCAACACCATGTCCGAGGTCTACCTCAAGTTTGGTCTTGAGACC
GGCACTCGGGACTTTGTGGGCCACTCTATGGCTCTGTGGACCAACGACGACTACCTCAAG
CAGCCTGCTCGAGAGACCGTGGAGCGAATCGCCCTCTACCTCAACTCCATGGCCCGATAC
GGAAAGTCTCCTTACATCTACCCCGTCTACGGTCTGGGTGAGCTGCCCCAGGGTTTTGCC
CGTCTCTCCGCCATCTACGGAGGTACCTTCATGCTTAACAAGCCCGTTGACGAGATTGTC
TACGGTGAGGACGGCAAGGTGACTGGTGTCAAGTCTGAGGGCGAGGTTGCTTCCGCTCCC
ATTGTCATCGGTGATCCCACCTACTTCCCTGAGAAGGTCAAGAAGACTGGCCAGAAGGTT
ATCCGAGCCATGTGCATTTTGGACCACCCCGTGCCCAACACTGGCAACCTGGACTCTGTT
CAGATCATCATCCCCCAGAACCAGGTCCAGCGAAAGAACGACATTTATATTGCTGTCATG
TCTTCTGCCCACAACGTCTGCGCCAAGGACCACTACCTGGCCATTGTCTCCACCATCATC
GAGACCGACAAGCCCCACATTGAGCTTGAGCCTGCCTTCAACCTGCTGGGTCCCCGAAAG
GAGACCCTGATGGGCATTGCCGACATCTACGAGCCCATCGAGGATGGCACCAAGGACGGA
GTCTTCATCTCCAAGTCCTACGACTCGTCTTCGCATTTCGAGTCGACCACTGACGATGTC
AAGGACATTTATTTCCGCCTGACTGGCCAGCCCCTGGTGGTCAAGCCCCGACCCGAGAAC
GAGGAGGATGAGAGCGCTATTAGAGCCGAGTAAGCTGCATGTCTGTAATGATAATATATT
GAAATGAGTGATTATGCAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E33649g_CDS-001

Protein length: 451 aa.
Product: GDP dissociation inhibitor, putative

>YALI0E33649g_CDS-001 MDEKYDVIVLGTGLTECILSGILSVEGKKVLHIDRQDHYGGESASLNLTQLYKKFRPGKE
DTKPDGLGRDRDWNVDLIPKFLMANGELSNILVHTNVTRYIDFKQISGSFVFRSGKIAKV
PSNRSEAINSSLMGMFEKRRLAKFLEFVGGYKEDDLATHQGLKLDTNTMSEVYLKFGLET
GTRDFVGHSMALWTNDDYLKQPARETVERIALYLNSMARYGKSPYIYPVYGLGELPQGFA
RLSAIYGGTFMLNKPVDEIVYGEDGKVTGVKSEGEVASAPIVIGDPTYFPEKVKKTGQKV
IRAMCILDHPVPNTGNLDSVQIIIPQNQVQRKNDIYIAVMSSAHNVCAKDHYLAIVSTII
ETDKPHIELEPAFNLLGPRKETLMGIADIYEPIEDGTKDGVFISKSYDSSSHFESTTDDV
KDIYFRLTGQPLVVKPRPENEEDESAIRAE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG