YALI0E33627g - RIM9, PalI

Overview

Description uniprot|Q7Z8R5 Yarrowia lipolytica YALI0E33627g RIM9/PalI Assistant of the Rim plasma membrane complex
Locus type CDS
Gene names RIM9, PalI
Locus tag YALI0E33627g

Location

Species Yarrowia lipolytica Positions 3994479..3996734
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 2256 (nuc.)
Previous locus YALI0E33605g Next locus YALI0E33649g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E33627g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E33627gYALI0E33627g_mRNA-001YALI0E33627g_CDS-001

Nucleotide sequence

 

>YALI0E33627g
ATGAAATCGGCAACAGGCTTGCTGGTCATTCTCCTGATCGCCTTCGCGCTCCAGCTGGTG
GCCGTACTGTCGGTACCCGTCACCAAAACCATCTCGCTGGGCTCGTACCAAGACCACAAG
TTTGGAGTATTTGGATACTGCAACGTCAAGGATGGAACCTGCTCGCCGGCAGGAGTAGGA
TACAACCTCGTGGACTCCGACAACGCAGGCTTCTCGCTGCCCTCCAACGCACGACACACC
CTGAGTAACCTGCTCATCGTCCATCCCATCGCCACCGGGTTCACCCTGATCCTCACAGTG
CTGGCTATGCTGGCTCACATCCAGGGACCGGCCTCGTCCTCAAGATACCTGCTCTTCTGC
CTGGTATTTTCGCTGCCCACATTCTTACTGGTTCTGCTGTCCTTCCTGGTGGATATTCTA
CTGTTTGTGCCCCACCTCGACTGGGGAGGATGGATCGTGCTGGCCGCCACCATTCTCGTG
GCTATTTCTGGAGTGGTACTCTGTGTTATGCGACGAACACTCTCCTCCAAGAAGGCCATG
AAGAAACACCAGCTGGATACCACCAACGAGCTGTCGGCCTTCTCGTCACACAAACACCTC
AACTCGTTTACCTATTCGTCCAAGGAAAATGTTCCTCAGTTCAGCGAGCTGCGATACGAG
ACCTCCCACGACACCTCCAAGGACGAGGAAGTTCTGCCTCTTACCTCCCATGTCTACGAG
GAGCCTGGCCATCACGTTGGAGATACGTCTTACGCTTCTCAGGGCACTAACAACTCTCGA
GTCAACCTCCTCACATCGGAGGAGCCCCAGGCACCCAAACGAGAGTCGCCCTTTAAAGAT
CAGAGACAGGACAGATACACCCCTGACCGATACGGTCCCAGCCCCGACAGATACGACCAG
GGTGGACCCGGCCGACCTCCAAACGGAAGTCGAGGTGTGCCTCCCAGACGTCCTTCTAAC
GGACCCACTCCTCCTGGTCAGGGTCCTTCCCCCACCGGAGCTTATGGCCGAAACAACAAT
CCCAATTACAACGGTGGTTATAACAACAGACTTCCTCGACCCCGGGGACCTCCTGGCTCT
AACAACTCCAGTCCCTTTCTGGGAGCTAGAAACGGCCCTGGCCTCACACCTCCCCACAAT
TTGCAAACTGCGACCACAGGCCCCATGCAGCTTCCTGCAGGCACTTACCTGCCTGGTGAA
GAGCCTGCCAACTCTCCTGACACATATGGTCCTGGTGTGATACCAATTCCGGAAATCAGA
CGTGAGAGCAAGGTGCCTGGTGCTTCTCCCACTCCTCCTCCCGTGTCCGGCAACTCTCCC
CCCACTGAGACTTCCGAGAGCGGTGTGTCTAGACCCTACAGAGGAAACTACAGCCGGCGA
GGTAGTGAGGCGAGTGCACAGACTCCTCCTAACGCTCAGCCGAACCCTCCCCCCGGAGGC
GCTCAGAACTACGAGTATGTTCCTGCTCGACAGCAGTGGAACCTCACCACTGAGGAAAGC
AACGCTACTGCGCCTGCTCCCGGACCCCAACCTCTTCAGCGAAACCACTCTTACGACACA
TACAATCCCTACAGAAGTGAGACACCTTCTGCACCTGGATCTCGAGCCCAGTCTCAAGGT
ACCGACGATAACCTTGGCACTTTGCATCAGCCTGTTCCTACCACCGTGACTCCCTCCAAC
TCTGGAGCTCTCAACAACAAGGACTCTCCTTGGTACTCTCCTCCCGTGGACGAGCAGTTC
CGAAACTCTTTCATTCCTGACGCTCCAGTATCGCCCTCCGAGTCCATCTCGTCCAATTTC
ACATCAGTGTCCCAGCGGGGTATCAACCCCCGATACTTCGGGGCTGATGGACCTCCAGGA
GGCCTCCACCAAGGAGCTCCTCCTCCTCCTCATATGCGAGGACCCCCACCTCATATGGGA
ATGGGTGGTCCCAACATGGGTGGCCACAACATGGGTGGCCACAACATGGGTGGTCCTCCT
CCCAATATGGGTCCTCGACCTCCTTATGGTGGCGGGGGACCTGGTCATGGCAATAAGCAC
GATCTCTTGCTTTCGGGCAACCCCGACTCCCAGTTCCAGCCTCAAACTCGGCGAAAACCT
GGTCGCGGCGGTCGACCCGGCATGTCTCCTGCTAGCTTAATGGGCCGAGATACCGGACCA
TACAGCATGAGATGAACAACTTAATCAGGCACTCTAGAGCCTGGTTAATACTTTTTATTC
TAGGCGTTGTAATTAATTTATTTGGTTGGTTAACAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E33627g_CDS-001

Protein length: 725 aa.
Product: Assistant of the Rim plasma membrane complex
Gene: RIM9, PalI

>YALI0E33627g_CDS-001 MKSATGLLVILLIAFALQLVAVLSVPVTKTISLGSYQDHKFGVFGYCNVKDGTCSPAGVG
YNLVDSDNAGFSLPSNARHTLSNLLIVHPIATGFTLILTVLAMLAHIQGPASSSRYLLFC
LVFSLPTFLLVLLSFLVDILLFVPHLDWGGWIVLAATILVAISGVVLCVMRRTLSSKKAM
KKHQLDTTNELSAFSSHKHLNSFTYSSKENVPQFSELRYETSHDTSKDEEVLPLTSHVYE
EPGHHVGDTSYASQGTNNSRVNLLTSEEPQAPKRESPFKDQRQDRYTPDRYGPSPDRYDQ
GGPGRPPNGSRGVPPRRPSNGPTPPGQGPSPTGAYGRNNNPNYNGGYNNRLPRPRGPPGS
NNSSPFLGARNGPGLTPPHNLQTATTGPMQLPAGTYLPGEEPANSPDTYGPGVIPIPEIR
RESKVPGASPTPPPVSGNSPPTETSESGVSRPYRGNYSRRGSEASAQTPPNAQPNPPPGG
AQNYEYVPARQQWNLTTEESNATAPAPGPQPLQRNHSYDTYNPYRSETPSAPGSRAQSQG
TDDNLGTLHQPVPTTVTPSNSGALNNKDSPWYSPPVDEQFRNSFIPDAPVSPSESISSNF
TSVSQRGINPRYFGADGPPGGLHQGAPPPPHMRGPPPHMGMGGPNMGGHNMGGHNMGGPP
PNMGPRPPYGGGGPGHGNKHDLLLSGNPDSQFQPQTRRKPGRGGRPGMSPASLMGRDTGP
YSMR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG