YALI0E33539g

Overview

Description similar to uniprot|P53616 Saccharomyces cerevisiae YNL066W (ohnolog of YIL123W) SUN4
Locus type CDS
Locus tag YALI0E33539g

Location

Species Yarrowia lipolytica Positions 3984061..3986874
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 2814 (nuc.)
Previous locus YALI0E33517g Next locus YALI0E33561g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E33539g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E33539gYALI0E33539g_mRNA-001YALI0E33539g_CDS-001

Nucleotide sequence

 

>YALI0E33539g
CACGTTCGACCACCCTACACTCCTTTTTCCATTGACCTAGAGACCGACAGGCGCCTTCTC
TATCTCATCCCCGAGCAACTTATACCCCCTACACCTTGCAATCGCAACGTTGTTCTAACC
CCAGACACATTCCTTTAAGTGAGTATACACACTACACGGCTGATGAAGCGTGTATTTGTT
GGACGCTGGATTTTGATTGAAATTGAGAGGGAAGGAAAATCGACAGCTGTTTTTCCGACT
ACGACGCGTTCCACGACGAGCCCCTACGTTTTCTCCAGTGAAATCGGCCAGTTTCTTTGC
TGTTATTATGAGGACGCTATTCTTGGAACTCCCTGCGTGATGTGTGTTGGTTTCGTGTTG
GGACATGGGCTGTGTGGAATGAGCACAGAACCACCCAAAAGAGCAGAGTGTCATGGAGGC
TTGCAAAACAGACGACAGAAAAACAAAACGGACACCAGTGAGCTCGACGTGATATCATTA
CTTCCGTGACCAAATGGAAGAAGGTCCGAATGTTCCACCGAGTGGCGATTTAACTCACGC
TCCGTGGCTACTGTCGTCCTTTTTTTTTCATTTTTTTGGGTCTACGTGTGCATGGTCACT
GCCCGTTGTCTAGACAACAGGCTTCGAATCTTATTTCGAGGCGCAGACGCGGACTCTGGG
ACTAGGGTTATACACATGGAGTCTAAGTTCCAGCTCGGATTTGAGTTGTGCTTAGCTCGA
CAGGAGCTCACTGGTTCAAGAGGGAGAGAGAGAGAGAGAGAGAGCAGAGTTAACACTGGG
TTGAGCGATCATCGAGAATCAGCAAAGTTGCACGAGAGCCGTGGCTGCGATCGTGATGGT
TTGATATGTCTCTGAAAGAATGAACGGATAGATGGTAACGTGAGCAATAAGGGACGCCTC
TCTTGATGACCCCTTACCATGTTCCCGTCAGTTGATCCAGCACCCCTGCAGATCCATCCG
TATGCTCTCCCTGACCTCCTTTCCTCTCGCTCCCTTTTTTTCCTGCACTTTTCCAGTCTG
CCTGATTTCTGTAGGCCTGTCTGTCCATCTGTTGTTTGTGTGCCAATCTTCGGCTGGGTT
GAGAGCTTCTTTTCGGGCAACGTTATTGTTTACGGCGTGCAGTTGACATCTGAACTCTTT
TGGTATTACGGTTAATAGCCATAAAGTTTTGGGGGGGAAAATTTCGTCCTTCTTTTACAT
CTCCCAAACTTTGCCGGCGCAGTTATATTGCCTCACCTCCCACCTCCTGAAATCCTTCTT
TCTGTATAGTCTGTTGCAACACCACAACACCGTCACTCCTTCAACAACACACAACTGGTA
ACGTCTCGCTGGTCGATTCTTACTGTCCATTCCTTTCCCCTCACACAACCAAAACTTGCA
ACAACTGCTCCAGGTGAGCCTTCGATATACATTAAACAACCCCACCTAACACCTCAGCCA
TGAAGTTTTCCACTCTTGCTCTGGCCGCAATGGCCGCCATTGGCTTTGCCGCCCCCGCCA
CTCCCGACGCTGACTGCAACGAGGAGAAGGAGGTCCGAGACTTCCACGCTCACCACCAGC
ACAAGCGAGCTGTGCAGGTCGAGTACGTCTACGTCACTGTCCTTGTTGACGGTAACGGAA
ACACCATTGAGCAGCAGCAGATTGCCACCACCGAGCTCCAGGAGGCTCCCTCCCCTGCTC
CCGCTACCTCCACCCAGGAGGCTGCTCCCGCTCCTTCCAGCACCCTTGTTGCTGCTTTTG
CCGCCAAGGAGCCCGTCACCCAGGAGGCTTCTTCTGCCGCTTCTTCCGCCGCTCCTTCCT
CCACCTCTGCCCCTAAGTCTTCTTCTGCTCCTTCCAAGCCTTCCAACGGAGGCTCCGGAG
GCATCACTGGTGACCTCGCTGCCTTCTCTGGTCCTTCCGAGAAGTTCCAGGACGGTACCA
TTGACTGTGGAGATTTCCCCTCCGGCCAGGGTGTCATTGCCCTGAACCAGCTTGGCTTCG
GCGGCTGGTCCGGTATCTACCACCCCGGTTCCACTGCCACCGGTGGCAACTGTGCCGAGG
GTGCTTACTGCTCTTACGCTTGCCAGTCTGGTATGTCCAAGACCCAGTGGCCTGATGAGC
AGCCCGCCAACGGTGTTTCCGTTGGTGGTCTTCTCTGCAAGGGCGGTAAGCTTTACCGAT
CCAACCAGCAGTCTGACTACCTCTGCGAGTGGGGCACCCAGTCCGCCATTGTGACCTCTT
CTCTCGATAAGGAGGTTGCTATCTGCCGAACCGATTACCCCGGTACCGAGAACATGGTTA
TCCCCACTGTCGTTGAGGCCGGTTCCTCCGGTGTTCCTCTTGCCGTCGTCAACCAGGATG
CTTACTACACCTGGATGGGCAAGCCTACCTCCGCTCAGTACTACGTCAACAACGCTGGTG
TTTCTTACCAGGATGGCTGTCTCTGGGGTACTTCTTCCGGTGATGTCGGTAACTGGGCTC
CTCTGAACTTCGGTGCTGGCGCTGCCGGCGGTATCTCTTACCTTTCCATCATTCCTAACC
CCAACAACCGAAACTCCGCTAACTTCAACGTTGAGATCATCGCTACTAACGGTGCTACTG
TCAACGGTAAGTGTGTCTACGAGAACGGTAAGTACAACGGTGGTGACTCCAACGGTTGCA
CTGTTGCTGTTACCGGCGGTGTTGCTGCCTTCCACCTTTACTAAAAGGTCTCAGGGTATT
TATGATGTTTTAGATTCTTTATAGGTAAGTTATATAGCTCTTCTTGCTATATTCAAAATA
TTACTGTGTATTATAAAATCAAATAGAGTGAAATTATGCAAATTTGAGAATGTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E33539g_CDS-001

Protein length: 415 aa.
Product: Cell wall protein related to glucanases, putative

>YALI0E33539g_CDS-001 MKFSTLALAAMAAIGFAAPATPDADCNEEKEVRDFHAHHQHKRAVQVEYVYVTVLVDGNG
NTIEQQQIATTELQEAPSPAPATSTQEAAPAPSSTLVAAFAAKEPVTQEASSAASSAAPS
STSAPKSSSAPSKPSNGGSGGITGDLAAFSGPSEKFQDGTIDCGDFPSGQGVIALNQLGF
GGWSGIYHPGSTATGGNCAEGAYCSYACQSGMSKTQWPDEQPANGVSVGGLLCKGGKLYR
SNQQSDYLCEWGTQSAIVTSSLDKEVAICRTDYPGTENMVIPTVVEAGSSGVPLAVVNQD
AYYTWMGKPTSAQYYVNNAGVSYQDGCLWGTSSGDVGNWAPLNFGAGAAGGISYLSIIPN
PNNRNSANFNVEIIATNGATVNGKCVYENGKYNGGDSNGCTVAVTGGVAAFHLY*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG