YALI0E33517g - KGD1

Overview

Description uniprot|Q6C3M8 Yarrowia lipolytica YALI0E33517g KGD1 2-oxoglutarate dehydrogenase complex E1 component
Locus type CDS
Gene name KGD1
Locus tag YALI0E33517g

Location

Species Yarrowia lipolytica Positions 3975032..3979067
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 4036 (nuc.)
Previous locus YALI0E33495g Next locus YALI0E33539g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E33517g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E33517gYALI0E33517g_mRNA-001YALI0E33517g_CDS-001

Nucleotide sequence

 

>YALI0E33517g
CCATAACGAGTTAACGTGAGTAGTACAATGGGTGTACTTACGGTCGAAACGATACCTGCG
GAGACGGCCAATTACGACATTTGTGGCCGCTGGAGTGGAATTGATGGAAAAAATCGCTTG
CGATTCGTTTGTTTCGATTTGAGAGGGTCTGGAACCCATGATTAAATCCCGCTAACAAAT
AGATGCTCAGACACGCTTTATTGAAAAGGACCCCCGTCCTCCCGCGACTCACAAGTCGCA
AGGCCTTCGTGCCATTGATCCAGAAACGAAAGTACTCTGATGACGTCTTCCTTACCACCA
ACGCCGCAAACTACATCGATGAGATGTATGCCGCATGGAAGGACGACCCCAAGAGTGTCC
ACGTCTCTTGGCAGGTGAGTGATAGTGGAGGAATCGGAAGCTGATGGCTTGTACTACGAC
TTGTGATGGTTATTTTTGGTTGTTTTGGTGGACATTCGACACTTGGCGTGTGAAGTGATG
GAGTTGGGCCCAAGGTCATGGAGGCAAGTGGCTTATTTGCAACCGAACTGTATCACGGAT
ACAGTGAGAGTGTACAGATAAGTCGTTTTGTTGACACGACACCTACGAATGGTTGACCCC
TTCCTCCTTGCTCCAGAATGCACTAGCTAGCACAATTGAGAGACCTGCTGTTGCATTTTT
CTGCGCCTGCCTGTAGCAATTTGTATGTCTCTCGATTGGCTCAGTACCTCTGCATCTCTG
CACACTAGACCTGCCCTTCGTTTGCGGTTGCCACCACTAGACTCAGGGTGTCTTCCCGCA
TTGGGAGTTACGGGTTGAGCCGGAGCATGGAAAAACGTGCATGCAGGACGCAGAATTGTT
GGTCGGAACGGACTAACAGGTGTATGCGCCGAGAGAGATCCCGGCGTGTGTGATTAGTAA
AGGTTCTGGACGTGTTTTTGACATACCCCACCTGACTATTCCTCAATTGTCCATTCCTGG
GCTTTTTGGATTTTAGTTTCATTACTTTTTGCACATGCTTGGTGTTTATCTCTAACTCCT
GCCCCAGCAAGTCCCAACTGCACCTTAATTTAGGCCTCCCTGACTTAACTAAATCCCAAC
TAAACCTACCCAGCAAATGTATCAACCAGAAGCACGGCCGCAATTGACCTATACTAACTC
AGTCTTACTTCAAGAACCTGGATGGTGGCCTTCCTGCCGACAAGGCATTCTCTGCCCCTC
CCACTATTGTGCCCTCTCCCTCTGGAGGTGTTCCCACCCCCGCTGCCCCCTCCGGCGCTC
CTTCTGACATCACCAACCACATGAAGGCCCAGCTGCTGGTTCGAGCCTACCAGGTCCGAG
GTCACACCAAGGCCAAGATTGATCCTCTTGGAATCTCCTTTGGCTCCGACAAGAACAAGA
AGCCCCCTAAGGAGCTGACCCTCGAGTTCTACGGATGGACCGACAAGGATCTCGACACCG
AGATCACTCTCGGCCCCGGTATCCTCCCCCGATTCGTCGAGAACGGTAAGAACAAGCGAA
CTCTCCGTGAGATTATCATGGACTGTGAACGAATCTACTGTGGCTCCTACGGTGTTGAGT
ACATCCATATTCCCTCTCGAGAGGAGTGTGAGTGGATCCGAGACCGAGTCGAGACCCCCA
AGCCTTACAACTACACCCCTGACCAGAAGCGACGAATGCTCGACCGACTTATCTGGGCTA
ACCTCTTCGAGACCTTCCTTGCCTCCAAGTTCCCCAACGACAAGCGATTCGGTCTTGAGG
GTGCCGAGACTGTCGTTGTCGGTATGAAGACTCTGATCGACCGATCCGTCGATGCCGGAA
TCGAGGACATTGTTATCGGTATGCCCCATCGAGGTCGACTCAACATGCTTTCCAACGTTG
TGCGAAAGCCCAACGAGTCCATTTTCGCTGAGTTCCAGGGATCTGCTGTCTTCGACGAGG
GTTCTGGAGATGTCAAGTACCATCTGGGTGCCAACTACCAGCGACCCACCCCCTCTGGAA
AGAAGGTCAACCTCTCTCTTGTCGCTAACCCCTCACATCTTGAGGCTGAGGACCCCGTTG
TCCTGGGTAAGACCCGAGCTATCCAGCACATGAAGCATGACGTCGGCACCTTCGACAAGG
CCATGGGTGTGCTCATGCACGGTGACGCTGCCTTTGCCGGCCAGGGTGTTGTCTACGAGA
CCATGGGCATGCACTCTCTGCCTGCCTACTCTACCGGTGGAACCATCCACATCATCGTTA
ACAACCAGATTGGTTTCACCACCGATCCTCGATTCTCCCGATCTACCCCCTACCCCTCCG
ATCTGGCTAAATCCATCGATGCCCCCATCTTCCACGTCAACGCTGACGATATGGAGGCCG
TCGACTTCATCTTCAACCTGGCTGCTGACTGGCGAGCTACCTTCAAGTCCGATGTCATCA
TCGATCTTGTCTGCTACCGAAAGTTCGGTCACAACGAGACCGATCAGCCCTCGTTCACTC
AGCCTCTCATGTACAAGAAGATTGCCGACAAGCCCAACCCTCTTGACATCTATGTCGACA
AGCTTCTCAAGGAGAAGACTTTTACCAAGGAGGACATTGAGGAGCACAAGCAGTGGGTCT
GGGGAATGCTCGAGGAGTCTTTCAAGAAGTCCAAGGACTACGTGCCCCATCAGAAGGAGT
GGCTCGCTTCTCCTTGGGACGACTTCAAGACCCCCAAGGAGCTTGCCACCGAGATCCTGC
CCCATCTCCCCACATCTGTTGAGGAGAAGAAGCTCAAGGAGATTGGAAAGGTCATCTCCT
CTGTTCCGGAGGGATTCACCCTTCACCGAAACCTCAAGCGAATCTTGTCCAACCGAGGCA
AGTCCGTTGAGGAGGGCCATGGCATTGACTGGTCCACTGGTGAGGCTCTTGCCTTCGGTA
CTCTGCTTGAGGAGGGCCACCACGTCCGACTTTCCGGTCAGGATGTCGAGCGAGGTACCT
TCTCTCAGCGACACGCTGTTGTCCACGACCAGGTTAACGAGACCACATATGTTCCTCTGA
ACCACCTGACCAAGGATCAGGCCGACTTCACCGTCTCCAACTCCCATCTTTCCGAGTACG
GTGTCATGGGCTTTGAGTACGGTTACTCCCTGGCTTCTCCTGAGGCCCTTGTCATCTGGG
AGGCTCAGTTTGGTGACTTCGCCAACACTGCCCAGGTCATCATTGATCAGTTCATTGCCT
CCGCCGAGACCAAGTGGTCTCAGCGATCCGGCTTGGTTCTGTCTCTGCCCCACGGATACG
ATGGACAGGGTCCCGAGCATTCTTCCGGACGAATTGAGCGATACCTGCTGCTCGGAAACG
AGGATCCTCTCCACTTCCCCTCTCCCGATAAGCTTGAGCGACAGCACCAGGACTGCAACA
TCCAGATTGCTTACCCCACTACCCCCGCCAACATCTTCCATCTGTACCGACGACAGATGC
ACCGAGCTTTCCGAAAGCCTCTGGCCTGCTTCTTCTCTAAGAACCTGCTGCGAAACCCCA
TGGCCAAGTCCGACCTCTCTGAGTTTGTTGGTGAGTCTCACTTCCAGTGGGTCATTGAGG
ACGACCAGCATGGCAAGACCATCAACAACAAGGAGGGCATCGAGCGAGTTCTCTTCTGTT
CCGGCCAGGTCTGGACTGCTCTCTTCAAGCGACGAGAGGATCTTGCTGACAAGAAGACTG
CTATCATCCGAATCGAGCAGCTGCACCCCTTCCCTTGGGAGCAGGTCCGAGAGCTTCTGG
ACTCTTACCCCAACCTTAAGGATATCTGCTGGGCTCAGGAGGAGCCTCTTAACGCTGGTG
CCTGGGTCCACATCCAGCCTCGAATGTACACCACCTTCCAGGCTACCAAGAACCACAAGC
ATGCCCACATTAGATACGCTGGCCGAAAGCCTTCTGCATCTGTTGCTGCCGGTACTAAGA
AGCTGCATCTTGCTGAGGAGGAGGCTCTTCTGAAGCAGGCTTTCCAGCAGGAGGATAAGG
CCTAAGTGGTCTGTTCACCCTTATGAATGTCATTTAATTGTATATGAAACGCTTGTTGAA
GTGTATGAACTGAGAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E33517g_CDS-001

Protein length: 1005 aa.
Product: 2-oxoglutarate dehydrogenase complex E1 component
Gene: KGD1

>YALI0E33517g_CDS-001 MLRHALLKRTPVLPRLTSRKAFVPLIQKRKYSDDVFLTTNAANYIDEMYAAWKDDPKSVH
VSWQSYFKNLDGGLPADKAFSAPPTIVPSPSGGVPTPAAPSGAPSDITNHMKAQLLVRAY
QVRGHTKAKIDPLGISFGSDKNKKPPKELTLEFYGWTDKDLDTEITLGPGILPRFVENGK
NKRTLREIIMDCERIYCGSYGVEYIHIPSREECEWIRDRVETPKPYNYTPDQKRRMLDRL
IWANLFETFLASKFPNDKRFGLEGAETVVVGMKTLIDRSVDAGIEDIVIGMPHRGRLNML
SNVVRKPNESIFAEFQGSAVFDEGSGDVKYHLGANYQRPTPSGKKVNLSLVANPSHLEAE
DPVVLGKTRAIQHMKHDVGTFDKAMGVLMHGDAAFAGQGVVYETMGMHSLPAYSTGGTIH
IIVNNQIGFTTDPRFSRSTPYPSDLAKSIDAPIFHVNADDMEAVDFIFNLAADWRATFKS
DVIIDLVCYRKFGHNETDQPSFTQPLMYKKIADKPNPLDIYVDKLLKEKTFTKEDIEEHK
QWVWGMLEESFKKSKDYVPHQKEWLASPWDDFKTPKELATEILPHLPTSVEEKKLKEIGK
VISSVPEGFTLHRNLKRILSNRGKSVEEGHGIDWSTGEALAFGTLLEEGHHVRLSGQDVE
RGTFSQRHAVVHDQVNETTYVPLNHLTKDQADFTVSNSHLSEYGVMGFEYGYSLASPEAL
VIWEAQFGDFANTAQVIIDQFIASAETKWSQRSGLVLSLPHGYDGQGPEHSSGRIERYLL
LGNEDPLHFPSPDKLERQHQDCNIQIAYPTTPANIFHLYRRQMHRAFRKPLACFFSKNLL
RNPMAKSDLSEFVGESHFQWVIEDDQHGKTINNKEGIERVLFCSGQVWTALFKRREDLAD
KKTAIIRIEQLHPFPWEQVRELLDSYPNLKDICWAQEEPLNAGAWVHIQPRMYTTFQATK
NHKHAHIRYAGRKPSASVAAGTKKLHLAEEEALLKQAFQQEDKA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG