YALI0E33377g

Overview

Description similar to uniprot|P38859 Saccharomyces cerevisiae YHR164c DNA2 DNA replication helicase
Locus type CDS
Locus tag YALI0E33377g

Location

Species Yarrowia lipolytica Positions 3955902..3960147
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 4246 (nuc.)
Previous locus YALI0E33378t Next locus YALI0E33385g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E33377g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E33377gYALI0E33377g_mRNA-001YALI0E33377g_CDS-001

Nucleotide sequence

 

>YALI0E33377g
ATGTCGAGATATTTTCTGGGGTCTGTGCCCCAAGATGATCCGTCACCGGCTGCTGAAGAG
GACGAAGACCCGTCCTCCGACTGGTCGGCAGCCACACCCATAAGGCCAAGGGAAAACATC
CCCAGTTCGGAACAGTACGAGTCCAGTGATGGCCACATTTCTTGCATTCTCTCCCCGCTA
GACAGGAACATTGTGATCCCTGACCAGAGCGACGAGCCTCCGATTCCAGTGGTCCTTGAT
CCAACCGAAATCCTTCTGAGACGCTACCGACCCGAATCATTCAACAACTCTGCCGCCAGC
TCAGCGGCAAATTCCACAACGGTAAAGGCTTCTTCGGCTGGTTCAGATGCCAACGCCACA
AGCAACTTCACCAACAACCTGGATCTCAACACGACAGTCATTGCAGACGATCCGTTCGTG
GAGGCGGTGTGCTCTACGCCCAAGGGAAGGGACATTAGCGGACGCTTTGAAGAGACTACA
CCAACAAGAGGTCCACCCGCTCCAAAGCCAGAAGAGTCTTACAAGTTGTCATCTTCACCG
CCAAAGGCCACAGCTGAGAAGCCTTCCATAACCACCAGCATCGAGGGTTTGAGTAGTCAG
CTTGATATCCTTGATGACTTGGATGACGACGATATTGATTTTGCATTGACCCAACATACC
CAGAAAAAGAAGGAAGTCAAGTTAACACAACCTACCATTAAAAAGGAAACTGATATCCAC
GTTTTGAAGGACATTGAGGACCTAAAAAAAACGCGTGGGTCTCCCATTAAGCTTTCAAAA
GCATCAATGGGGTCTAATATTAGGCCCCTGACTGAAGTCAAGAAGGTTGATGTCAAGTCA
TTCATTGACGACCTGGAGGACGAAGACTTTGATAGTGATTTGGAACTCGAATTCACACAG
GTTCGGGCCAAGAAGAAGCCGCGCCTTCAGACATCGAGATATAAGCTCGTCACTGACCAT
GTTATGTCTCAACGAACTCACAAGGAAAACGCCTTACCCGTGGAGATTGACTACAAACGA
GACGATGTTCTGCGGTTCAGAATCGTCGAAGTGGAGGAAAGTTCGACTCAGATCGCTCTA
GTTGTGGAGGACAGCAAGGCCCAGCAACACCGTGTTGCTTTGCGAGGTTGCTGGATGCGA
GCAATACCTTGTGTGGGAGACATTTGTCATTTGATCGATGAGTCATCAAATGACGACATG
GATCTCGATTTCGAGATGGATTTCGACTACATTGTGGACGACATGAAGGGCGATATGCTT
TTTATTCTGAATCCTGACACTCTGGTGACCTGTACAGCCGTTGCTGAGGCCCACCAGTGC
ACTCGAAACGTGGTTCTGAAAGACAAAATGCAGGGACCGAGAGGAATCGGGTCTATTTTT
GCACTCTTGGGTGTCATTATCCACGAGACCATCCAGATGTGCTTTGGAGCTGTGAGATAC
GACGCCGAGTTTGTGGAGTCATGTGCTGAGACCGTTACCAAAGCAAACATGGATGGCATC
ATGCTCTCTGGTGAGAGTTTTGACTCTGTGTTTGCCAAAATCAAGGACCGACTACCGAAC
ATTGTGGAGTGGTTTAGAGAGTATATGCGTCAGACTCCCTCTGCAGTGGCGATTGAGAAT
CGAACAGGTAAGAAGAGAACTCTTGCTATCACCAAAGTTGTCGATGTTGAAGAAGAGATC
TGGTCTCCGCGATACGGAATCAAGGGTAAGATCGATGCCACCATTGAAGTCCGGGAGGGA
AACCACCGATACTTGGTTCCTCTGGAAGTCAAGACGGGAAAATCTACAACTCATATTCCT
CACCGGTCGCAAACGGCGCTGTACACTCTCATGTTGCATGATCGGTACACTTGTCCCATC
AACTTTGGAGTTTTGTATTACTCTGCCACCTCTGAGACCCTTGTCATTCCAGCTGTCAAG
GACGAAATTCATAACCTGCTTGCTATTCGAAACGAGGTTGCTAGCTTCATGCGACAAGGG
TCTCGAGACATGCCTGACGTTATCTACGATCAAGGCCAGTGTGACCGGTGTTTCCAGAAG
TCGGAATGTATGGTCTATTACCGACTCTACGATACGTATTTGAAGGAGTATATGGGTGAA
GATGGTGGAGCGACCGCCAACAAGGCCAGATTCTTGCAGGAGACCGAACATGTGACTGAG
AAGGACTCTCAATTCTTTAACCACTGGGATGCCTTGCTGGCCAAGGAAGGAAGTGATACT
GCAGTGCTCAAACGAGAGGTGTGGACCATGCTGTCCAAGGATAGAGAAAGGGAAGGGAGG
TGAGTATTGATGAGATTATGCTGCCTTTAATTTTACTAACAGAGATGTTTCTCAAGCCTT
ATTATTGACAACGTGGAGAAGAATGCCAATTCATTGTGGTACACGTTCAAGTCTCCTGAT
GGAAGCGAGATCCCCTATGCATCTGTCAACATTTCGCCGGGTGACCGAGTAGTCATTTCT
GATGAGGCTGGTCATTACTGTTTGGCTATGGGTACTCTGCTTGGCTCGTCTTCAGAGACT
GTGCGATGTGCTCTTGATCGTCGACTTGAGTTCTCTCTGCAGAAACTCCAGGGTTTCAGA
TCCAACGACAACCAGGTTTTCCAGAGCATGCTGACCCACAGTTCTCAGAGCCATGAAGCC
CCCATAGATTTTAGGTTTCGGGTTGATCGTGACGACTTCGCTTTTGGCCTGGGAGTTGCC
CGTAACAACCTGTTTTCTCTGTTTGCCAAGCATCTCGGTACCGATGAGAGCCCCCAGAAG
ATCGAGCAACTGCGTTCATGGATTGTTGATTTGGCACCCCCTCAGCCTGTTGCTGGAGAG
CCCACTGTCAAACTCGGTCGACTCAATTCCGACCAGACTAGGGCTGTCCACCACATCCTG
AACTCAAAGGATTACAGTCTTCTACTAGGAATGCCTGGAACCGGTAAGACCACCACCATT
GCTGAGATTATCATGGAGCTGGTCAAGAACGGAAAGACTGTTCTCCTGAGTAGTTTCACT
CATTCTGCTGTCGACAACATTTTGTTGAAGCTGATGCAGCACCCTTCATGTAACTTCGAC
ATGCTGAGATTGGGAAGCACCTCCAAAATTCACCCTGAGGTTGCGGAGCATTACGCAGCC
AACAACCGACGGAACTACGAGACCCGAGAAGAGTTCGAGAAGCTTTTTCTTGCTCCTCCA
GTTGTTGGTGCAACTGCCTTGGGTATTGGAGACTGGGTTCTTCAGGAGCGTCATTTCGAT
TACTGCATTGTTGATGAGGCCTCCCAAATCACCCTTCCTTTCTGCCTCGGTCCAATCCGC
TATGCAGACAAGTTCGTTCTTGTTGGAGATCATTACCAGCTGACGCCCATTGTCAAGAAT
CCGGAAGCTGCTGGACTGCGAGAGTCTCTTTTCAAGATGCTATGTGACGCACATCCCACC
CAGGTAGTTAATCTGGGTATTCAGTACCGAATGTGTGCTGATATCATGTTGCTGTCCAAC
ACTCTGATCTATGATGGCAAGCTGAAGTGTGGTAGTGACGAGGTGGCCAACCAATCTTTG
GCTGTTCCTCAGCTCTCCAAACTGCGTACTTTGTACGCCGATGGACTCCCCAATGGCGAC
TATCTAGGTCATGTTCTGGATCCCAAGCGGAAGGTTATCTTCCTCAACACGGATCTTGTT
CCTGCGCAGGAAACTATTGCCGGCGATAGAATCCATAACCCCACTGAAGCTGTCATAGTG
GGCCAGATTGTGGAGGCTCTTTGTCTGTGTGGCGTTGAAGACTCACAGATTGGATGCATC
TCGCAGTACAGAGCTCAGCTGAAACTTATCAACAAGGAGCTTGCCCTGCGAAGTGGCATC
GAAGTTATGACCGCAGACAAGTTCCAGGGCCGAGACAAGGACTGCATTGTGGTGTCTCTC
GTGCGGTCAAACAACGAGCAGCGAGTCGGTGATCTTCTCAAGGATTGGCGACGGCTCAAT
GTGGCCTTTACGCGATCTCGATCCAAGCTCATTGTCATTGGATCTCGAGCTACCCTTGAG
TCGTTTGATCTTCTCAAGGAGTTCTTGCGTCTGATCGATGACAATGGATGGATGTATTCG
CTTCCAAAGGACTGTACTAAGATGTACAGCATTGTCAAACAGGGTACTTCCCCTAGAAAG
AAGCAAAAGCGTGTTGGCCTGAGCCAGCGCTTGATCGATAACCGGCCTATCATGAAGAAC
ATTCTTGAGGGTCTTTAGATAATATATATTATTTCCATTCATTTAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E33377g_CDS-001

Protein length: 1391 aa.
Product: Tripartite DNA replication factor, putative

>YALI0E33377g_CDS-001 MSRYFLGSVPQDDPSPAAEEDEDPSSDWSAATPIRPRENIPSSEQYESSDGHISCILSPL
DRNIVIPDQSDEPPIPVVLDPTEILLRRYRPESFNNSAASSAANSTTVKASSAGSDANAT
SNFTNNLDLNTTVIADDPFVEAVCSTPKGRDISGRFEETTPTRGPPAPKPEESYKLSSSP
PKATAEKPSITTSIEGLSSQLDILDDLDDDDIDFALTQHTQKKKEVKLTQPTIKKETDIH
VLKDIEDLKKTRGSPIKLSKASMGSNIRPLTEVKKVDVKSFIDDLEDEDFDSDLELEFTQ
VRAKKKPRLQTSRYKLVTDHVMSQRTHKENALPVEIDYKRDDVLRFRIVEVEESSTQIAL
VVEDSKAQQHRVALRGCWMRAIPCVGDICHLIDESSNDDMDLDFEMDFDYIVDDMKGDML
FILNPDTLVTCTAVAEAHQCTRNVVLKDKMQGPRGIGSIFALLGVIIHETIQMCFGAVRY
DAEFVESCAETVTKANMDGIMLSGESFDSVFAKIKDRLPNIVEWFREYMRQTPSAVAIEN
RTGKKRTLAITKVVDVEEEIWSPRYGIKGKIDATIEVREGNHRYLVPLEVKTGKSTTHIP
HRSQTALYTLMLHDRYTCPINFGVLYYSATSETLVIPAVKDEIHNLLAIRNEVASFMRQG
SRDMPDVIYDQGQCDRCFQKSECMVYYRLYDTYLKEYMGEDGGATANKARFLQETEHVTE
KDSQFFNHWDALLAKEGSDTAVLKREVWTMLSKDREREGRCFSSLIIDNVEKNANSLWYT
FKSPDGSEIPYASVNISPGDRVVISDEAGHYCLAMGTLLGSSSETVRCALDRRLEFSLQK
LQGFRSNDNQVFQSMLTHSSQSHEAPIDFRFRVDRDDFAFGLGVARNNLFSLFAKHLGTD
ESPQKIEQLRSWIVDLAPPQPVAGEPTVKLGRLNSDQTRAVHHILNSKDYSLLLGMPGTG
KTTTIAEIIMELVKNGKTVLLSSFTHSAVDNILLKLMQHPSCNFDMLRLGSTSKIHPEVA
EHYAANNRRNYETREEFEKLFLAPPVVGATALGIGDWVLQERHFDYCIVDEASQITLPFC
LGPIRYADKFVLVGDHYQLTPIVKNPEAAGLRESLFKMLCDAHPTQVVNLGIQYRMCADI
MLLSNTLIYDGKLKCGSDEVANQSLAVPQLSKLRTLYADGLPNGDYLGHVLDPKRKVIFL
NTDLVPAQETIAGDRIHNPTEAVIVGQIVEALCLCGVEDSQIGCISQYRAQLKLINKELA
LRSGIEVMTADKFQGRDKDCIVVSLVRSNNEQRVGDLLKDWRRLNVAFTRSRSKLIVIGS
RATLESFDLLKEFLRLIDDNGWMYSLPKDCTKMYSIVKQGTSPRKKQKRVGLSQRLIDNR
PIMKNILEGL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG