YALI0E33319g

Overview

Description weakly similar to uniprot|Q7S6Y5 Neurospora crassa NCU05578.1 predicted protein
Locus type CDS
Locus tag YALI0E33319g

Location

Species Yarrowia lipolytica Positions 3947587..3949193
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1607 (nuc.)
Previous locus YALI0E33297g Next locus YALI0E33341g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E33319g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E33319gYALI0E33319g_mRNA-001YALI0E33319g_CDS-001

Nucleotide sequence

 

>YALI0E33319g
ATGCACCCACCCCACGTTGAGAAGACGGAGCGTCTGGTGGCGTACTCCATCCGGTTCCTC
ATGTCGCCCAAGGAGTACAAGAACCTGGTGGCCAATCTGGAGGCCAAGAAAAACACGGAG
ATGCTCCATTACAACATGGTCGCACCCTCGGCCGTGGAAAAGAGCGCCGAAGAGCGTGGA
GATTTTACCCAGGCCACTGCTCGAGCTGGTACTCGAACGTTTCTGCGTACCCACGCACTT
GTAGTGGCCATTGTCGCCATTTCTCGGCTCATCAACAGACAGAAGCCCGATAGCATTATC
AAGGACATCATCTTCAACAAAACTGGCCTGCGAATTGCCTCTTCCACAGCCTCAATTCTT
GTGGCCTTCCGAATCTGCGACCGGCTACTCACATCTACGCGTGAATACATTCTGCAACCC
CAGAGCCGCAAGTTCCGAAAGAAGCACCGACTCTTCACACGATGGATCGTCAGTGAGCGA
ACCCCCACTTTCTTCGCTGCCCTGGCAGGTGGCCTCTTCCTTGTCATCTACCCCAGAGAC
TTTGGCCGGTCCTACATTGCTCTCTACACGGCTTCCAAGGCATGTGAGTTCTTTTACAAC
TTCCTGGACGACCGGGGTTTCACAGCCAAGATTCCTAGATGGCTCGGATCCTGGGTCCTC
TTCCCCTTCGCCTACGGACAACTCTTCTCTGCCTTCTTCTTTCACCCTGAGACCGTGTCC
CCCACCTTCTCCAAATACTTCCTCAAGCTGTCGGAACCCTACCTCCCCCATCGACCTGCA
GGATACTCTGGAAAGGTGCCGTGGCCCACTCCTCGACAGTTTGTTGACGGTGTTGCGCTT
ATCGCCAAGCAGCGGTACCCCAAGTTCAACTCTCCCATTGTGTACCCTGACTCGTACGCT
CTCCCTGCTAACCTCACTGCCATTGAGCCTGTTGTATCTGGTGCTCACCCTGTTCTCCAC
ACTCTGTCGGGAGCTCTGCTGCACCCCAATGAGGCCTCTGAGTTGCCCCACTACCTGAAA
TACATCTCGGAGCAGTTTGTGGAGGTCGGAAAGAAGGTCCTTGGTCTGCATCTTATCATG
GGTCTTCTGCGACGAAAGGGCAAGTCTCTGTCTAGCATCCTCTCCTCCTCCGTGTCTGGT
TCTATCCGAACTACCGCATTCCTGGTTCTTTTGGTCTCCAACTCGTGGGCTGGTATCGGA
CTGATGCAGAAGTTCCTCGGCAACAAGACTGCTCCTGTTGATCGATTCCGATTCATCGGT
ATCCTGTCTGGTCTTTGGGCTATGATCGACCAGTCTGCCGGCCGAGGCCGATGGATGTAC
ACTGCCAGAATGGGTGTCATGTCTTACTGGAACGAGCTTGTCAAGCGAAAGGTTGTCAAG
CCCATCCCCCACGGAGATGTCTACCTGTTCGCCGTGTCTCTCGCCGTCATTCTCTCTCTG
CTGCAGAAGAGCCCCGAAAGCATTTCCGGACCGGGTCTGAGAAAGACCCTCAACTGGTTC
CGGTCTAACGAGTACGCCGACCCCGTCAAGCTGGAGGATCTCAAGGAGAAGTCTGCTTAG
AATATAAATGTGAATATATGAGAGACTAATCTGTCCTTGGATTTTTT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E33319g_CDS-001

Protein length: 520 aa.
Product: Conserved hypothetical protein

>YALI0E33319g_CDS-001 MHPPHVEKTERLVAYSIRFLMSPKEYKNLVANLEAKKNTEMLHYNMVAPSAVEKSAEERG
DFTQATARAGTRTFLRTHALVVAIVAISRLINRQKPDSIIKDIIFNKTGLRIASSTASIL
VAFRICDRLLTSTREYILQPQSRKFRKKHRLFTRWIVSERTPTFFAALAGGLFLVIYPRD
FGRSYIALYTASKACEFFYNFLDDRGFTAKIPRWLGSWVLFPFAYGQLFSAFFFHPETVS
PTFSKYFLKLSEPYLPHRPAGYSGKVPWPTPRQFVDGVALIAKQRYPKFNSPIVYPDSYA
LPANLTAIEPVVSGAHPVLHTLSGALLHPNEASELPHYLKYISEQFVEVGKKVLGLHLIM
GLLRRKGKSLSSILSSSVSGSIRTTAFLVLLVSNSWAGIGLMQKFLGNKTAPVDRFRFIG
ILSGLWAMIDQSAGRGRWMYTARMGVMSYWNELVKRKVVKPIPHGDVYLFAVSLAVILSL
LQKSPESISGPGLRKTLNWFRSNEYADPVKLEDLKEKSA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG