YALI0E33297g

Overview

Description similar to uniprot|Q873I9 Neurospora crassa B9B11.100 related to pirin
Locus type CDS
Locus tag YALI0E33297g

Location

Species Yarrowia lipolytica Positions 3946027..3947245
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1219 (nuc.)
Previous locus YALI0E33275g Next locus YALI0E33319g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E33297g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E33297gYALI0E33297g_mRNA-001YALI0E33297g_CDS-001

Nucleotide sequence

 

>YALI0E33297g
ATGACTTACATATTACGCTGCATCTCAGATGCGCAAGAACCTTACTGCGCAAGGCTGCTT
ATAGGGATCGAAGAAATATATAAACCCCTCTCTAAGGAGCTCCATTGGAATATCAGTCTC
ATTTTGAACATTCAAACGGAAACACACGCACAAACAACACAAACGATGCCTTTTACACCC
CGAAAAGTAGCCCGAAAGTTCACTGCCATTGAGCAGTCTGAGGGAGTTGGAGCTCGAGTT
CGACGAGCCGTTGGCAACATGCAAGTTCGAAACTTCTCTCCTTTCCTTCTTTTTGACCAT
TTCAAGGTCCCCTCTACCGCTGGTTTCCCAGACCATCCTCATAGAGGCCAGGAGACTATC
ACATACGTCATTGATGGTTCTGTTGATCATGAGGACTTCACTGGTAGCAAGGGTACTCTT
AACGAGGGTGATTTGCAGTTCATGACAGCTGGAAAGGGAATTGTTCATGCTGAGATGCCT
GCCCCTGGTCCTGATGGAGAAACCAAGATTGTTGAGGGTATCCAATTGTGGGTTGATCTC
CCCAAGGAGCTCAAGAACTGTGATCCTCGATACCGGGATCTTCGAAAGGACGAGATCCCC
GTGGCCGAGTCTCCAAACAAGGATGTTGTTGTCAAGGTCATTTCCGGAGAAAGCATGGGT
GTGGATTCTGTAAAGGATCTTGCCTACACTCCCGTCTGGTACCTCGACTACAACATTGAT
GCCAGCAAGTACGACGGCCGAAAGCTTGAGCAGACCATGCCCCATGGCTTCAATGTTCTT
CTTTACGTCATGAAGGGAGGTGCTACCGTTGACGGCCAGGTTCTCAAGACCAACGATGTG
GCCATATTTGACACTGCCGGTGACGGAGTTGAGTTCCGAGCATCCGAAACCGAGGACTCT
CGAATCATCGTCGTGGGTGGCCAGATTCTCGACCAACCCATTGTTCAGCACGGCCCTTTC
GTTTCTACCACTCGGGAGGGTATCATGTCTGCCATGATCGATTACCAGAGCGGTAACAAC
GGCTTTGAGCGAGCTCCTACCTGGGTCAGTGAGATTGGTAAGCGAATGACTGGACGATAA
ACACCAAGGTCAGAGTATGTACAGTATGTACTAGACAGCACAAATCCACTAACTTTCCCA
CCAAACACAGCCAGCACGACATGGCAACGCCGTCTTATATAAAGTAAATAATTGCTACTT
AATGAAATACAACATGAAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E33297g_CDS-001

Protein length: 360 aa.
Product: Pirin, putative

>YALI0E33297g_CDS-001 MTYILRCISDAQEPYCARLLIGIEEIYKPLSKELHWNISLILNIQTETHAQTTQTMPFTP
RKVARKFTAIEQSEGVGARVRRAVGNMQVRNFSPFLLFDHFKVPSTAGFPDHPHRGQETI
TYVIDGSVDHEDFTGSKGTLNEGDLQFMTAGKGIVHAEMPAPGPDGETKIVEGIQLWVDL
PKELKNCDPRYRDLRKDEIPVAESPNKDVVVKVISGESMGVDSVKDLAYTPVWYLDYNID
ASKYDGRKLEQTMPHGFNVLLYVMKGGATVDGQVLKTNDVAIFDTAGDGVEFRASETEDS
RIIVVGGQILDQPIVQHGPFVSTTREGIMSAMIDYQSGNNGFERAPTWVSEIGKRMTGR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG