YALI0E33143g

Overview

Description highly similar to uniprot|Q12074 Saccharomyces cerevisiae YPR069c SPE3 putrescine aminopropyltransferase (spermidine synthase)
Locus type CDS
Locus tag YALI0E33143g

Location

Species Yarrowia lipolytica Positions 3934387..3935411
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1025 (nuc.)
Previous locus YALI0E33121g Next locus YALI0E33165g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E33143g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E33143gYALI0E33143g_mRNA-001YALI0E33143g_CDS-001

Nucleotide sequence

 

>YALI0E33143g
ATGACCGAGCTCACTCACCCTTCCATCGTCGACGGCTGGTTCCGAGAAATCAGTGACACC
ATGTGGCCTGGCCAGGCCATGGCCCTGCGTGTCAACCAGATTCTCCACGTTGAGAAGTCC
AAGTACCAGGACGTTCTGGTTTTCGAGTCCACCGACTACGGCAACGTTCTCGTCCTTGAC
GGAGCCATCCAGGCCACCGAGCGAGACGAGTACGCCTACCAGGAGATGATTGCGCATCTT
GCTCTCAACTCCCACCCCAACCCCAAGAAGGTGCTTGTTATTGGAGGTGGTGACGGTGGT
GTCCTGCGAGAGATTGTCAAGCACGACTGTGTCGAGGAGGCTGTCCTCTGTGACATTGAT
GAGGCCGTGCCCCGTGTTTCCAAGCAGTACCTCCCCACCATGTCTGTCGGATTCAACCAC
CCCAAGACCAAGGTCCACATTGGTGACGGCTTCAAGTTCCTCCAGGAGTACCAGAACACC
TTCGATGTCATCATCACCGACTCCTCCGACCCCGAGGGTCCCGCCGCCTCTCTCTTCCAG
AAGCCCTACTTTGAGCTCCTCTCCGGTGCTCTGACCGAGAAGGGTGTTATCACCACTCAG
GGAGAGTCCATCTGGCTGCACATGAAGATCATTAAGGAGCTGCGACAGGCTTGCAAGCAG
GTCTTCCCCTCCGCCGACTACGCTTACTGCACCATCCCCACCTACCCCTCCGGCCAGATT
GGTTTCATGGTCTGCTCCAAGGACAAGGACGCCAACCTCCGAAAGCCCCTTCGATCCGTC
TCTCCCGAGGAGGAGTCCAAGCTCTACCGATACTACAACAAGGACATCCACTCTGCTTCC
TTCGTTCTCCCCACCTGGGCTCGAGACGATCTTGCTTAAGTGCACCCTACTGGTAGGCTG
GTCTTGATTAGTAAAATGTATTAACGTGTAACCGTTTGATTGTAGTTGTGAGTTTATTAG
TTGGAACTTTAACAGATTGAAATTTTCACTCCGTATATAGTGGATGACTAAGCGAAAGTG
AAACT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E33143g_CDS-001

Protein length: 293 aa.
Product: Spermidine synthase, putative

>YALI0E33143g_CDS-001 MTELTHPSIVDGWFREISDTMWPGQAMALRVNQILHVEKSKYQDVLVFESTDYGNVLVLD
GAIQATERDEYAYQEMIAHLALNSHPNPKKVLVIGGGDGGVLREIVKHDCVEEAVLCDID
EAVPRVSKQYLPTMSVGFNHPKTKVHIGDGFKFLQEYQNTFDVIITDSSDPEGPAASLFQ
KPYFELLSGALTEKGVITTQGESIWLHMKIIKELRQACKQVFPSADYAYCTIPTYPSGQI
GFMVCSKDKDANLRKPLRSVSPEEESKLYRYYNKDIHSASFVLPTWARDDLA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG