| Description | similar to uniprot|Q08285 Saccharomyces cerevisiae YOL142w RRP40 protein involved in ribosomal RNA processing, component of the exosome complex responsible for 3 end processing and degradation of many RNA species singleton |
|---|---|
| Locus type | CDS |
| Locus tag | YALI0E33121g |
| Species | Yarrowia lipolytica | Positions | 3933345..3934314 |
|---|---|---|---|
| Strain | CLIB 122 | Strand | Antisense |
| Chromosome | YALI0E | Total length | 970 (nuc.) |
| Previous locus | YALI0E33099g | Next locus | YALI0E33143g |
Here is a representation of the structure of the locus YALI0E33121g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :
By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.
>YALI0E33121g
ATGTCAAAAATCACTTATAGCATCTTCGGATCTTCCCTTGTTGAAGTGTACACCGGTATG
AGTATGTACAAACTTTTACTTGCCCTGGCTACTCTACAATTAACTTGCCTCCCAACATGC
AGCCTGAATTTATTTTATCATGCATATTTTGAAGGCCCATCTTGCCCAGCATACCACACG
ATACACACAATGATTTGCCTCCCAGGAGACCAGATTGATTTCCCTAAGCAGGACCTCACA
CTCGGCCCCGGATTTCTCGACGATCCTCTAGCCGCAGACCCCATCCCTATCGTTGCAGGT
GAGGTGCATCGAACCGATCCCGAAGACAAGAAGACTAAAAATCAGAACCTCGTTTACATC
GACAGTGACACTCGGCGGTACATTCCTGCCGTCAACGACAATGTCATCGGTACTGTGACC
ACTCGACACGCTGAGGGATACAAAGTGTCTGTTTCTGACCTCTCTCCGGGTGTCCAGCTT
AACGCCATGGCCTTCCCCAACGCCTCCAAGAAGAACAGAGTCAACCTGGCTAACGATGCA
CTCGTCTACGCGCGAGTGTCTTCTGCATCTCGAGAAGTCGAAGCTGAGATCGAGTGTATT
GATCCTCAGTCCGGCAAGGCCGGCGGGTACGGTGAACTTAAGGATGGTTTCTGCTTCGAC
GCACCGATAGCATTTACTCGACAGTTGCTTTTCAAAGGACACACCGTGCTCGATACCATT
GGAGAGCTGGTTCCCTTTGAGATTGCCATTGGAGTCAACGGAAAGATCTGGGTCAAGAGC
GAAGACGTTCCCACCACCCTCAAGATCTACCAGTGCATCGACAAGTGCCGGGAATGGCCT
GAAGACCAGGTCCGGGAGAATGTGGAGCAGATTATGAGCGCACCATAGGTGCTATAATGG
CAACAGCATAGACGGACGAGCCAGGTATGGCCCGTACATATTATTATTTAATACATTGTT
CATATTTAAT
Locus sequence
Up/downstream sequence
Protein length: 296 aa.
Product: Exosome non-catalytic core component, putative
Browse the locus neighborhood with JBrowse:
ATG