YALI0E32725g

Overview

Description weakly similar to uniprot|C4R2Q0 Komagataella pastoris PAS_chr2-2_0152 hypothetical protein
Locus type CDS
Locus tag YALI0E32725g

Location

Species Yarrowia lipolytica Positions 3878282..3880299
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 2018 (nuc.)
Previous locus YALI0E32703g Next locus YALI0E32736g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E32725g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E32725gYALI0E32725g_mRNA-001YALI0E32725g_CDS-001

Nucleotide sequence

 

>YALI0E32725g
ATGCTCAGCAAAGACTGCATCATTGGCCAGAGGGCCTTTCTCAACAAAAGCCCCGACGAC
AAGGATCCTGAGGCACAGTTTGGCGTGTTCCAGTTCCAGGGCAGCACGAATCAAAACGTC
TTCTATGGAACGCCTACAGTGATGGTGCCCAGGGACTGGTGTCCTGAGGGAACTGGAGAG
GGCTCTCCTTCACCGGCTGTGTGTTTTCACTGCTTTGCTGTCAAGAGCAAGCGGTCTCAT
CAGGGCGTGGCTCGCTTGCTACGGTGTGGAGGATGTGGTCTGGCGATGTACTGTCGTGCA
GAGTGTCAGAAGTCGGACTGGACAGAGCATCACAAGTACGAGTGCAAGATCTTCAGCAAC
TGGACCACTCCATTGTTGCCTGGCGTGAGTTTGGCGCTTATTGTGCGTACAGCTTTTGCC
ATGGCTCAAGATACAGATCTTCGAACACGGATATTTCAGATGCACACTGAAGGTAACTAC
AAGTCCCCTACGCGTGAAGTTTTGAACTCCATGGCGGACGAGATTGCTGGACAGCTGTAC
AAATGTTTCAGTGACAATATGGAAATTGCTATTCCCGAATCACTTCTGAACAGCGCACCT
TGGATCGAGGCAAGTGGACTGAACAAAGACCAGTTGAGACATATGATCATGGCACTGAAG
AACCATACACTTTATGTCGGCACTGTTGGAGCTCAACCTCATGTCGCCGTGTTTGACGCA
GATCTGGCCTTTATCAACCACTCGTGTGCTCCTACAGCTGTCATGTATCTGCGTGATTCA
GACGAGGGTAAACATCTCTGTGTGGAGGTTGAAAGTGACACCAGCGCTTACTCCACAGAA
ATCACCCTCAACTACACAATGTACTCAGACCCCCTGCATAAGATCAACACCATAGACACG
CTTCCGTTCGATTGTGACTGCTACAAGTGCAAGGTATACGACGTTGACGGAAGCTTCTCG
TGTCATGCTTGCAGGCTCCCAGTGGGCCCTTTGAAGAGCGACGAGTACGGAGGAGGATGG
GAAACACAACAAAAGTGCCAGTACTGTTTCCAGAGATTGCATTTCTCGTACCACGAGTGT
CGAAAGTTTGAGTATGAGGCCAGAGAAGTCTTGCAGAAGGTCAGGCGTCATCTCCTCAGC
CCGTACGAGGACGTTCCGGGTGACCTGATTCCCAGTGCGGGCGGACTGGCACCTATGCGT
AAGGACGAGACGTATGGCGAGGAATGGCTCCCTCTTCGACTGCTTACTTACATCATGTCG
ATGGACATGGTTTCTACCAACCACAGACTGTTCCAGGACACCATGGCTCTTCTGCTTGTT
GCCTTTCAGGGGGCCCCATCTATCTTTCTACCCATCATTGGTTTCTTTCAGAAACGAACC
CGCGAAACTATGCCCTTGGGCGCCAATGGGTACGCCCAGAAGCTCTACAATTATTTACAT
GTCACATGGCCTCTCTTTGAGATGGTATCTGATGCCCTTTCGCGTGCCGTCGTAACTCAG
ATGTTGACTGAGCCTGCTCCTCGACCTGCTGATGCCCATCCTCCTGGGGCTGCTGGCGTT
CCCCTGACATCAACTGCATCCACTTACGCAGCTCTCATGCTGGTGTACGACTATGGCAGC
AAGTGTCTGGCTGAAATTGAGGATGCTGTGGACAAGAGAGCTTCTCTGCGAGTTGCATTT
GGCCATTTGACAATGCAGAACCAATGTTTCCTGGTTGACTTGAAACGCCAGGCAGCAGCT
GGCGGTATCAACTGGTTTGATGCAGACGCGCAGCAAAAGTATGGAGCTCAGTTCAAGTCC
ATATACCTGCTGTTGGGCCCCCAGAGCTCAGTTAAGATGAAGTTCCCTTCGGCTGTGTGG
AATGTGATGAACTTCAACGATGAGATGGAGTTGCTCATCCGTGGAGACGCCTCTTCTTTT
GACGCAATGGCTAGAGAGAAATGCAAAGAGGCAATGACGAATGCATAATCTCTGGTGCTG
ACCAAGTACCCAGATGTATATTAATAAATGATTTATAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E32725g_CDS-001

Protein length: 656 aa.
Product: Conserved hypothetical protein

>YALI0E32725g_CDS-001 MLSKDCIIGQRAFLNKSPDDKDPEAQFGVFQFQGSTNQNVFYGTPTVMVPRDWCPEGTGE
GSPSPAVCFHCFAVKSKRSHQGVARLLRCGGCGLAMYCRAECQKSDWTEHHKYECKIFSN
WTTPLLPGVSLALIVRTAFAMAQDTDLRTRIFQMHTEGNYKSPTREVLNSMADEIAGQLY
KCFSDNMEIAIPESLLNSAPWIEASGLNKDQLRHMIMALKNHTLYVGTVGAQPHVAVFDA
DLAFINHSCAPTAVMYLRDSDEGKHLCVEVESDTSAYSTEITLNYTMYSDPLHKINTIDT
LPFDCDCYKCKVYDVDGSFSCHACRLPVGPLKSDEYGGGWETQQKCQYCFQRLHFSYHEC
RKFEYEAREVLQKVRRHLLSPYEDVPGDLIPSAGGLAPMRKDETYGEEWLPLRLLTYIMS
MDMVSTNHRLFQDTMALLLVAFQGAPSIFLPIIGFFQKRTRETMPLGANGYAQKLYNYLH
VTWPLFEMVSDALSRAVVTQMLTEPAPRPADAHPPGAAGVPLTSTASTYAALMLVYDYGS
KCLAEIEDAVDKRASLRVAFGHLTMQNQCFLVDLKRQAAAGGINWFDADAQQKYGAQFKS
IYLLLGPQSSVKMKFPSAVWNVMNFNDEMELLIRGDASSFDAMAREKCKEAMTNA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG