YALI0E32703g - SLS1

Overview

Description uniprot|Q99158 Yarrowia lipolytica YALI0E32703g SLS1 Nucleotide exchange factor for Kar2p
Locus type CDS
Gene name SLS1
Locus tag YALI0E32703g

Location

Species Yarrowia lipolytica Positions 3876458..3877797
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1340 (nuc.)
Previous locus YALI0E32681g Next locus YALI0E32725g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E32703g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E32703gYALI0E32703g_mRNA-001YALI0E32703g_CDS-001

Nucleotide sequence

 

>YALI0E32703g
ATGAAGTTCAGCAAGACTCTACTACTGGCCCTCGTGGCTGGTGCCCTGGCCAAGGGCGAG
GATGAAATCTGCAGAGTTGAGAAGAACTCCGGCAAGGAAATCTGCTACCCCAAGGTGTTT
GTCCCTACCGAGGAGTGGCAAGTGGTATGGCCCGACCAGGTGATTCCCGCGGGCCTGCAC
GTGCGAATGGACTATGAAAACGGCGTCAAGGAGGCCAAAATCAACGACCCTAACGAAGAG
GTTGAGGGCGTGGCTGTTGCAGTTGGAGAAGAGGTTCCCGAGGGCGAAGTTGTCATTGAG
GACCTCACCGAGGAGAACGGGGATGAGGGTATTAGCGCCAACGAAAAGGTCCAGAGGGCC
ATTGAGAAGGCCATCAAGGAAAAGCGAATCAAGGAGGGCCATAAGCCCAACCCCAACATT
CCTGAAAGTGACCACCAGACCTTCTCTGATGCCGTCGCTGCCCTGAGAGACTACAAGGTC
AATGGACAGGCAGCCATGCTTCCAATTGCTCTTTCCCAACTCGAGGAACTGTCTCACGAG
ATTGATTTCGGTATTGCTCTGAGCGACGTTGACCCCCTCAATGCGCTCCTGCAGATCCTT
GAAGACGCAAAGGTCGATGTGGAGTCTAAGATCATGGCTGCTCGAACCATTGGTGCTTCT
CTAAGAAACAACCCACATGCTCTCGACAAGGTGATTAACTCCAAGGTTGATCTGGTCAAA
TCTCTTCTGGACGATCTTGCCCAGTCTTCCAAGGAGAAGGCAGATAAGCTCTCTTCTTCT
CTTGTTTACGCCCTCTCTGCGGTTCTGAAGACTCCAGAGACTGTCACTCGATTCGTTGAT
CTTCACGGAGGTGACACTCTTCGACAGCTGTACGAGACTGGCTCTGACGACGTAAAAGGA
CGAGTGTCTACTCTAATTGAGGATGTTCTCGCCACCCCTGATCTGCACAACGACTTCTCT
TCGATCACAGGCGCTGTCAAGAAACGCTCTGCCAACTGGTGGGAAGACGAACTCAAGGAG
TGGTCTGGCGTGTTCCAGAGATCGCTCCCCTCTAAGCTGTCCTCCAAGGTGAAGTCCAAG
GTCTATACTTCTCTGGCAGCTATTCGACGAAACTTCCGAGAGTCTGTTGATGTCAGCGAA
GAGTTCCTCGAGTGGCTTGACCACCCCAAGAAGGCTGCTGCTGAGATCGGAGATGATCTC
GTCAAGCTTATTAAGCAGGACCGAGGCGAGTTATGGGGCAATGCCAAGGCTCGAAAGTAC
GACGCTCGTGATGAGCTTTAAGATGCGTCTCAGCTATGATATTATAAATAATGATAATGA
TAATGATTGTATGAAATTTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E32703g_CDS-001

Protein length: 427 aa.
Product: Nucleotide exchange factor for Kar2p
Gene: SLS1

>YALI0E32703g_CDS-001 MKFSKTLLLALVAGALAKGEDEICRVEKNSGKEICYPKVFVPTEEWQVVWPDQVIPAGLH
VRMDYENGVKEAKINDPNEEVEGVAVAVGEEVPEGEVVIEDLTEENGDEGISANEKVQRA
IEKAIKEKRIKEGHKPNPNIPESDHQTFSDAVAALRDYKVNGQAAMLPIALSQLEELSHE
IDFGIALSDVDPLNALLQILEDAKVDVESKIMAARTIGASLRNNPHALDKVINSKVDLVK
SLLDDLAQSSKEKADKLSSSLVYALSAVLKTPETVTRFVDLHGGDTLRQLYETGSDDVKG
RVSTLIEDVLATPDLHNDFSSITGAVKKRSANWWEDELKEWSGVFQRSLPSKLSSKVKSK
VYTSLAAIRRNFRESVDVSEEFLEWLDHPKKAAAEIGDDLVKLIKQDRGELWGNAKARKY
DARDEL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG