YALI0E32483g

Overview

Description similar to uniprot|P32335 Saccharomyces cerevisiae YLR203C MSS51 Nuclear encoded protein required for translation of COX1 mRNA
Locus type CDS
Locus tag YALI0E32483g

Location

Species Yarrowia lipolytica Positions 3855020..3856549
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 1530 (nuc.)
Previous locus YALI0E32461g Next locus YALI0E32494g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E32483g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E32483gYALI0E32483g_mRNA-001YALI0E32483g_CDS-001

Nucleotide sequence

 

>YALI0E32483g
ATGTTCTCGACACGAATCTGTCCACGAGTGTCTGTGCGAGCAGCAGGGCTGGTGTGCGCT
TCTCGCCCACTCGCCGGCGCCGTCCAGCAGCAGAGAGGCATGCTCAAGTTTCTCAAACAG
ACAATTGGTCTGGACGACAGCGGCAATGAAAATGATCCGACCCCCGAGAACCGGTTCCAT
CTGTGGGACCAGTCACCCAACCAGGATATTCGGGAGCGGGCCGCGGTGATCCGCGCCCGT
TCCAAGTGTCCCGTGACCGGCGAGGACGTGCGATACGTCTGTCCCAAGTCCGGAATCCCC
ACCCATCACAGCAGAGAGGCCTACGAGTCGGATGCGACGTTCCAAGAGCAAAACAAGGCC
GAAAAGCTTTTCATGGCCAACATCTACGAGCATGATCTGCGATCCGGTCGAGATTTCCCC
GAGTTTGATCTCCCCGGAGCTCAGGACAAGGATGACACTGTCAACTTCATGAACTGGGAT
CTGTTTCTGTACACCCGAGACTTTTACTCCATGGATACCGAGTTCCAGATGGCAGCCGTG
ACCAAGATGCTGTCATACCCCGTCACAATCGGCTCCGTGCTGCACACAATGTCCCCTTAC
GCTCTCAAGCCTAACGGTCCTCTGACCCTCGAGGGTCTCAAATCCCTGGCTGCTCTGCGA
TACTCTCTGTTCCCCATCGACAAGTCCCGTGCTCTGAACGATCGACCCATCCGATTGTTC
ATTCTGGGCGCCCGAGCCGAGTCCCAGCTGCCCCCCCACGTGTGGAAACAGCTCTCGTAT
CTCATCCCTACCGCCAAGTGGGAGCTGTACTTCATTGGTCCTGAGGCCTACTACGACCGA
GACAAGCACCAGTACGTGCAGCACTCGCGACCCGTGGAGATGAAGATCGACGACACCATG
ACCTTCAAGTTCTACTCGGACTACTTCCATGTGCTCCACGAGGCTCATGATTTCTTCCCT
TACGACCCCTACCTGGATGCATTCTTCCTGTTCCACCCCGGTCTGGGAGCCCCCGAGGCC
ATGGATCAGTGGGCCAAGTCGTTGCCCGGTCTGCTGGAGTCCAAGTGTGCCATCTTCTCC
ACCGGTTTCCACAAGGATGACCTTGAGCGAGACTGGAACTGGCTGATGGACAAGTTTGGC
TCCAAGCTGGACGTGCTGCTGGAGCCCTCAGAGAACATCTTTGGCTCGACCAAGTGGGAG
CTCAACGATCTCAATTCTACGGAGGTTTACCAGTTTAACCAGCAAATGTTTGCTTTCCGA
GGCAAGCGATACCACGCCATTCCCCAGTAATGTACATAGGGCGTGAATATTATGACAGAT
GAAATGAGGAAGAAGAGCGAGGAAGATGAGCAGCTCTCACCAAACCACTGACTGAATTGT
AGTAAAAACAGTACTTATTTGACCAAGCTCTGCAGTTTTACTGTACATACATACCAAGGG
GTTGTATCATGTATACTACAAAGTAATTACACCAACTTTACTCATTAGAAACATTATACA
GAACCAATGAATGGTATATACAACTTTTAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E32483g_CDS-001

Protein length: 430 aa.
Product: Specific translational activator for the mitochondrial COX1 mRNA, putative

>YALI0E32483g_CDS-001 MFSTRICPRVSVRAAGLVCASRPLAGAVQQQRGMLKFLKQTIGLDDSGNENDPTPENRFH
LWDQSPNQDIRERAAVIRARSKCPVTGEDVRYVCPKSGIPTHHSREAYESDATFQEQNKA
EKLFMANIYEHDLRSGRDFPEFDLPGAQDKDDTVNFMNWDLFLYTRDFYSMDTEFQMAAV
TKMLSYPVTIGSVLHTMSPYALKPNGPLTLEGLKSLAALRYSLFPIDKSRALNDRPIRLF
ILGARAESQLPPHVWKQLSYLIPTAKWELYFIGPEAYYDRDKHQYVQHSRPVEMKIDDTM
TFKFYSDYFHVLHEAHDFFPYDPYLDAFFLFHPGLGAPEAMDQWAKSLPGLLESKCAIFS
TGFHKDDLERDWNWLMDKFGSKLDVLLEPSENIFGSTKWELNDLNSTEVYQFNQQMFAFR
GKRYHAIPQ*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG